Top 10 genes with highest correlation to Rv2865/relF:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2558/- | (cc=0.5537) | info on Rv2558/- |
| Rv1996/- | (cc=0.5506) | info on Rv1996/- |
| Rv0049/- | (cc=0.5364) | info on Rv0049/- |
| Rv2345/- | (cc=0.5184) | info on Rv2345/- |
| Rv0150c/- | (cc=0.4979) | info on Rv0150c/- |
| Rv2885c/- | (cc=0.4951) | info on Rv2885c/- |
| Rv2966c/- | (cc=0.488) | info on Rv2966c/- |
| Rv2231c/cobC | (cc=0.4877) | info on Rv2231c/cobC |
| Rv0866/moaE2 | (cc=0.4664) | info on Rv0866/moaE2 |
| Rv1857/modA | (cc=0.4656) | info on Rv1857/modA |
Correlation of Rv2865/relF with Rv2558/-
Normalized LFCs for Rv2865/relF:
(description and provenance of datasets)
| Rv2865/relF | Rv2558/- | |
| Fe_supp_jason_reseq | 0.036 | -0.021 |
| low_pH_jason_reseq | -0.353 | 0.815 |
| NO_jason_reseq | 0.641 | 0.226 |
| B6_jason_reseq | -0.052 | -0.969 |
| MHCII_jason_reseq | -0.012 | -0.241 |
| Isoniazid02 | -3.936 | -2.203 |
| Rifampicin4 | 0.56 | -1.633 |
| Ethambutol3 | -3.694 | -1.734 |
| Meropenem3 | -3.71 | -1.416 |
| Vancomycin16 | -1.157 | -1.73 |
| Rv2680_day32 | 1.134 | 0.877 |
| H37Rv_KO_MarP | 0.697 | -0.066 |
| hypoxia_3wks | 0.14 | -0.574 |
| hypoxia_6wks | 0.347 | -0.564 |
| glycerol | -1.521 | 0.197 |
| cholesterol | -1.07 | -0.069 |
| AJ | -1.714 | 0.217 |
| Bibs02 | -2.649 | -0.105 |
| Bibs02c | -0.477 | -0.764 |
| BL6 | 1.273 | -0.49 |
| BL6a | 0.948 | 0.26 |
| BXD01 | -0.442 | 0.048 |
| BXD010 | 1.873 | 0.933 |
| BXD011 | 1.22 | -0.269 |
| BXD03 | 0.245 | 0.0 |
| BXD04 | 0.842 | 0.227 |
| BXD05 | 1.027 | 0.154 |
| BXD06 | 0.201 | -0.352 |
| BXD07 | 0.843 | 0.27 |
| BXD08 | -0.048 | 0.201 |
| BXD09 | 1.067 | -0.388 |
| CAST | -0.185 | 0.073 |
| CCcont | 0.633 | 0.393 |
| DS01 | -0.645 | -0.033 |
| DS02 | -1.801 | 0.466 |
| DS04 | -1.97 | 0.181 |
| DS0c | -0.11 | 0.39 |
| GP01 | -0.065 | 0.777 |
| GP02 | -1.016 | 0.019 |
| GP0c | 0.332 | 1.058 |
| NOD | 1.91 | 0.778 |
| NZO | -0.146 | 0.724 |
| PWK | -0.571 | 0.509 |
| H37Rv_KO_CtpC | 0.285 | 0.305 |
| H37Rv_KO_CtpD | 0.33 | 1.664 |
| H37Rv_KO_Rv1272 | 0.288 | -0.621 |
| H37Rv_KO_SugABC | 1.604 | 0.347 |
| H37Rv_KO_MbtN | 1.113 | 0.57 |
| Trans05 | 0.942 | 0.431 |
| macrophage_unactivated | -1.335 | 0.877 |
| IL1 | 0.756 | 0.273 |
| Rapamycin | -0.114 | 0.199 |
| Tcell | 0.274 | -0.205 |
| GMCSF | 0.084 | 0.283 |
| IFNab | -0.544 | 0.463 |
| IFNg | 0.823 | -0.342 |
| IFNg_GMCSF1 | 0.374 | 0.575 |
| Rv1432_day32 | -0.164 | -0.445 |
| Rv1565c_day32 | 0.0 | -0.499 |
| secA2_input | 0.163 | 0.695 |
| delta_Rv3594 | 4.483 | 1.826 |
| delta_Rv3717 | 4.268 | 0.552 |
| delta_Rv3811 | 4.653 | 0.571 |
| delta_Rv0954 | 4.184 | 1.689 |
| PonA1 | 3.704 | 0.878 |
| EccD1_KO | 1.506 | 0.635 |
| EspI_KO | 0.445 | -0.325 |
| PE35_KO | 0.604 | 0.502 |
| PPE68_KO | -0.39 | -0.038 |
| glycerol2 | -0.909 | -0.705 |
| lignocerate | -0.47 | -0.028 |
| oleate | -0.756 | -0.081 |
| phosphatidylcholine | -0.65 | -0.436 |
| acetate | 0.063 | 0.878 |
| glucAc | -1.127 | 0.561 |
| Rv0950ko | -1.058 | -0.16 |
| Rv1096ko | -1.52 | -0.326 |
| Rv3684ko | -1.831 | -1.932 |
| delta_otsA_trehalose | 1.719 | -0.347 |