Top 10 genes with highest correlation to Rv2855/mtr:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1025/- | (cc=0.5004) | info on Rv1025/- |
| Rv2604c/snoP | (cc=0.486) | info on Rv2604c/snoP |
| Rv1109c/- | (cc=0.4648) | info on Rv1109c/- |
| Rv3568c/hsaC | (cc=0.4599) | info on Rv3568c/hsaC |
| Rv2605c/tesB2 | (cc=0.4454) | info on Rv2605c/tesB2 |
| Rv3400/- | (cc=0.4445) | info on Rv3400/- |
| Rv0916c/PE7 | (cc=0.428) | info on Rv0916c/PE7 |
| Rv2683/- | (cc=0.4272) | info on Rv2683/- |
| Rv3552/- | (cc=0.4254) | info on Rv3552/- |
| Rv0100/- | (cc=0.4229) | info on Rv0100/- |
Correlation of Rv2855/mtr with Rv2683/-
Normalized LFCs for Rv2855/mtr:
(description and provenance of datasets)
| Rv2855/mtr | Rv2683/- | |
| Fe_supp_jason_reseq | -0.163 | 0.644 |
| low_pH_jason_reseq | 1.715 | 1.859 |
| NO_jason_reseq | -0.415 | 0.184 |
| B6_jason_reseq | -0.114 | 1.008 |
| MHCII_jason_reseq | -0.839 | -0.926 |
| Isoniazid02 | 1.285 | 0.076 |
| Rifampicin4 | -0.252 | -0.092 |
| Ethambutol3 | -0.173 | 0.063 |
| Meropenem3 | 0.204 | 1.222 |
| Vancomycin16 | 0.231 | 0.255 |
| Rv2680_day32 | 0.131 | 0.618 |
| H37Rv_KO_MarP | 0.502 | -0.49 |
| hypoxia_3wks | 0.263 | -1.655 |
| hypoxia_6wks | 0.0 | -0.733 |
| glycerol | -0.061 | -0.688 |
| cholesterol | -0.392 | -0.305 |
| AJ | -1.612 | -1.309 |
| Bibs02 | -1.893 | -0.6 |
| Bibs02c | -0.567 | -0.74 |
| BL6 | 0.037 | 0.381 |
| BL6a | 0.0 | 0.55 |
| BXD01 | 0.778 | 1.41 |
| BXD010 | -0.039 | 1.21 |
| BXD011 | 1.595 | 1.792 |
| BXD03 | 0.153 | 1.022 |
| BXD04 | 0.14 | 1.699 |
| BXD05 | -0.126 | 1.385 |
| BXD06 | 0.498 | 1.319 |
| BXD07 | 0.395 | 1.064 |
| BXD08 | 0.0 | 1.166 |
| BXD09 | 0.464 | 1.447 |
| CAST | -0.215 | -0.265 |
| CCcont | 0.525 | 0.582 |
| DS01 | -0.299 | -1.088 |
| DS02 | -0.676 | -0.206 |
| DS04 | -0.603 | -0.409 |
| DS0c | -1.053 | -2.23 |
| GP01 | -0.433 | -1.143 |
| GP02 | -0.68 | -0.243 |
| GP0c | -0.981 | -1.159 |
| NOD | -0.609 | -0.236 |
| NZO | -0.186 | 0.675 |
| PWK | 0.274 | -0.877 |
| H37Rv_KO_CtpC | 0.672 | 0.298 |
| H37Rv_KO_CtpD | -0.499 | 0.834 |
| H37Rv_KO_Rv1272 | -0.132 | 0.362 |
| H37Rv_KO_SugABC | -0.231 | 0.458 |
| H37Rv_KO_MbtN | -0.716 | -0.775 |
| Trans05 | 0.666 | 0.416 |
| macrophage_unactivated | -0.133 | -0.423 |
| IL1 | -0.125 | -0.964 |
| Rapamycin | -0.261 | -0.865 |
| Tcell | 0.629 | 1.02 |
| GMCSF | 0.51 | -1.138 |
| IFNab | 0.0 | -0.562 |
| IFNg | 0.214 | -1.069 |
| IFNg_GMCSF1 | -0.852 | -1.712 |
| Rv1432_day32 | -0.859 | -0.953 |
| Rv1565c_day32 | -0.057 | 0.096 |
| secA2_input | 1.005 | -0.647 |
| delta_Rv3594 | -0.471 | -0.569 |
| delta_Rv3717 | 0.378 | -0.356 |
| delta_Rv3811 | -0.085 | -0.824 |
| delta_Rv0954 | 0.388 | -0.366 |
| PonA1 | 0.293 | -0.806 |
| EccD1_KO | 0.898 | -0.112 |
| EspI_KO | 1.78 | -0.228 |
| PE35_KO | 0.335 | 0.875 |
| PPE68_KO | 0.71 | 0.374 |
| glycerol2 | -0.062 | -0.981 |
| lignocerate | 0.027 | -0.647 |
| oleate | 0.394 | 0.393 |
| phosphatidylcholine | 0.176 | -0.161 |
| acetate | -0.437 | -0.294 |
| glucAc | -0.385 | -1.034 |
| Rv0950ko | 0.262 | -0.223 |
| Rv1096ko | 1.384 | -0.712 |
| Rv3684ko | 0.144 | 1.683 |
| delta_otsA_trehalose | 1.645 | 0.183 |