Top 10 genes with highest correlation to Rv2855/mtr:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1025/- | (cc=0.5004) | info on Rv1025/- |
| Rv2604c/snoP | (cc=0.486) | info on Rv2604c/snoP |
| Rv1109c/- | (cc=0.4648) | info on Rv1109c/- |
| Rv3568c/hsaC | (cc=0.4599) | info on Rv3568c/hsaC |
| Rv2605c/tesB2 | (cc=0.4454) | info on Rv2605c/tesB2 |
| Rv3400/- | (cc=0.4445) | info on Rv3400/- |
| Rv0916c/PE7 | (cc=0.428) | info on Rv0916c/PE7 |
| Rv2683/- | (cc=0.4272) | info on Rv2683/- |
| Rv3552/- | (cc=0.4254) | info on Rv3552/- |
| Rv0100/- | (cc=0.4229) | info on Rv0100/- |
Correlation of Rv2855/mtr with Rv0100/-
Normalized LFCs for Rv2855/mtr:
(description and provenance of datasets)
| Rv2855/mtr | Rv0100/- | |
| Fe_supp_jason_reseq | -0.163 | -1.157 |
| low_pH_jason_reseq | 1.715 | 0.35 |
| NO_jason_reseq | -0.415 | 0.116 |
| B6_jason_reseq | -0.114 | -2.098 |
| MHCII_jason_reseq | -0.839 | -3.594 |
| Isoniazid02 | 1.285 | 0.471 |
| Rifampicin4 | -0.252 | -0.788 |
| Ethambutol3 | -0.173 | -0.143 |
| Meropenem3 | 0.204 | 0.225 |
| Vancomycin16 | 0.231 | 0.698 |
| Rv2680_day32 | 0.131 | -2.779 |
| H37Rv_KO_MarP | 0.502 | -0.075 |
| hypoxia_3wks | 0.263 | 0.662 |
| hypoxia_6wks | 0.0 | -0.43 |
| glycerol | -0.061 | -0.085 |
| cholesterol | -0.392 | -0.963 |
| AJ | -1.612 | -5.057 |
| Bibs02 | -1.893 | -1.788 |
| Bibs02c | -0.567 | -1.234 |
| BL6 | 0.037 | -2.369 |
| BL6a | 0.0 | -0.591 |
| BXD01 | 0.778 | 0.07 |
| BXD010 | -0.039 | -0.177 |
| BXD011 | 1.595 | 0.163 |
| BXD03 | 0.153 | 0.766 |
| BXD04 | 0.14 | 0.041 |
| BXD05 | -0.126 | -0.93 |
| BXD06 | 0.498 | -1.533 |
| BXD07 | 0.395 | -0.63 |
| BXD08 | 0.0 | 1.03 |
| BXD09 | 0.464 | -0.952 |
| CAST | -0.215 | -4.897 |
| CCcont | 0.525 | -1.134 |
| DS01 | -0.299 | -0.77 |
| DS02 | -0.676 | 0.608 |
| DS04 | -0.603 | -4.455 |
| DS0c | -1.053 | -1.906 |
| GP01 | -0.433 | -1.681 |
| GP02 | -0.68 | -2.372 |
| GP0c | -0.981 | -0.633 |
| NOD | -0.609 | -4.553 |
| NZO | -0.186 | -5.306 |
| PWK | 0.274 | -4.628 |
| H37Rv_KO_CtpC | 0.672 | -0.739 |
| H37Rv_KO_CtpD | -0.499 | 0.185 |
| H37Rv_KO_Rv1272 | -0.132 | -0.627 |
| H37Rv_KO_SugABC | -0.231 | -2.275 |
| H37Rv_KO_MbtN | -0.716 | -0.201 |
| Trans05 | 0.666 | -0.938 |
| macrophage_unactivated | -0.133 | 1.54 |
| IL1 | -0.125 | -1.109 |
| Rapamycin | -0.261 | -0.249 |
| Tcell | 0.629 | 1.15 |
| GMCSF | 0.51 | -0.628 |
| IFNab | 0.0 | 1.212 |
| IFNg | 0.214 | -0.171 |
| IFNg_GMCSF1 | -0.852 | -0.635 |
| Rv1432_day32 | -0.859 | -4.427 |
| Rv1565c_day32 | -0.057 | -3.532 |
| secA2_input | 1.005 | -0.385 |
| delta_Rv3594 | -0.471 | -1.621 |
| delta_Rv3717 | 0.378 | -1.655 |
| delta_Rv3811 | -0.085 | -0.589 |
| delta_Rv0954 | 0.388 | -1.932 |
| PonA1 | 0.293 | -3.653 |
| EccD1_KO | 0.898 | -0.145 |
| EspI_KO | 1.78 | 0.254 |
| PE35_KO | 0.335 | -0.21 |
| PPE68_KO | 0.71 | -0.4 |
| glycerol2 | -0.062 | 0.198 |
| lignocerate | 0.027 | -1.262 |
| oleate | 0.394 | 0.449 |
| phosphatidylcholine | 0.176 | -0.465 |
| acetate | -0.437 | -1.234 |
| glucAc | -0.385 | -3.631 |
| Rv0950ko | 0.262 | 1.393 |
| Rv1096ko | 1.384 | 0.796 |
| Rv3684ko | 0.144 | 1.411 |
| delta_otsA_trehalose | 1.645 | 0.192 |