Top 10 genes with highest correlation to Rv2855/mtr:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1025/- | (cc=0.5004) | info on Rv1025/- |
| Rv2604c/snoP | (cc=0.486) | info on Rv2604c/snoP |
| Rv1109c/- | (cc=0.4648) | info on Rv1109c/- |
| Rv3568c/hsaC | (cc=0.4599) | info on Rv3568c/hsaC |
| Rv2605c/tesB2 | (cc=0.4454) | info on Rv2605c/tesB2 |
| Rv3400/- | (cc=0.4445) | info on Rv3400/- |
| Rv0916c/PE7 | (cc=0.428) | info on Rv0916c/PE7 |
| Rv2683/- | (cc=0.4272) | info on Rv2683/- |
| Rv3552/- | (cc=0.4254) | info on Rv3552/- |
| Rv0100/- | (cc=0.4229) | info on Rv0100/- |
Correlation of Rv2855/mtr with Rv0916c/PE7
Normalized LFCs for Rv2855/mtr:
(description and provenance of datasets)
| Rv2855/mtr | Rv0916c/PE7 | |
| Fe_supp_jason_reseq | -0.163 | -0.388 |
| low_pH_jason_reseq | 1.715 | -0.231 |
| NO_jason_reseq | -0.415 | 0.357 |
| B6_jason_reseq | -0.114 | -1.096 |
| MHCII_jason_reseq | -0.839 | -1.966 |
| Isoniazid02 | 1.285 | -0.023 |
| Rifampicin4 | -0.252 | 0.747 |
| Ethambutol3 | -0.173 | 1.126 |
| Meropenem3 | 0.204 | 0.147 |
| Vancomycin16 | 0.231 | 0.626 |
| Rv2680_day32 | 0.131 | 0.0 |
| H37Rv_KO_MarP | 0.502 | 0.181 |
| hypoxia_3wks | 0.263 | 0.55 |
| hypoxia_6wks | 0.0 | -0.99 |
| glycerol | -0.061 | -2.782 |
| cholesterol | -0.392 | -2.164 |
| AJ | -1.612 | -0.709 |
| Bibs02 | -1.893 | -2.731 |
| Bibs02c | -0.567 | -1.958 |
| BL6 | 0.037 | 0.435 |
| BL6a | 0.0 | -1.24 |
| BXD01 | 0.778 | -0.45 |
| BXD010 | -0.039 | 0.404 |
| BXD011 | 1.595 | 0.904 |
| BXD03 | 0.153 | 1.019 |
| BXD04 | 0.14 | -1.349 |
| BXD05 | -0.126 | -0.493 |
| BXD06 | 0.498 | 0.019 |
| BXD07 | 0.395 | -0.628 |
| BXD08 | 0.0 | -0.433 |
| BXD09 | 0.464 | -0.702 |
| CAST | -0.215 | -0.445 |
| CCcont | 0.525 | -0.114 |
| DS01 | -0.299 | -0.375 |
| DS02 | -0.676 | -1.812 |
| DS04 | -0.603 | -1.321 |
| DS0c | -1.053 | 0.27 |
| GP01 | -0.433 | -1.077 |
| GP02 | -0.68 | 0.34 |
| GP0c | -0.981 | -1.314 |
| NOD | -0.609 | -0.171 |
| NZO | -0.186 | 0.968 |
| PWK | 0.274 | 0.597 |
| H37Rv_KO_CtpC | 0.672 | 1.304 |
| H37Rv_KO_CtpD | -0.499 | -0.412 |
| H37Rv_KO_Rv1272 | -0.132 | 0.041 |
| H37Rv_KO_SugABC | -0.231 | 1.18 |
| H37Rv_KO_MbtN | -0.716 | 1.584 |
| Trans05 | 0.666 | 1.003 |
| macrophage_unactivated | -0.133 | 0.085 |
| IL1 | -0.125 | -0.08 |
| Rapamycin | -0.261 | 1.037 |
| Tcell | 0.629 | 0.583 |
| GMCSF | 0.51 | 1.22 |
| IFNab | 0.0 | 0.082 |
| IFNg | 0.214 | 1.181 |
| IFNg_GMCSF1 | -0.852 | 0.924 |
| Rv1432_day32 | -0.859 | 0.0 |
| Rv1565c_day32 | -0.057 | 0.818 |
| secA2_input | 1.005 | -0.938 |
| delta_Rv3594 | -0.471 | 0.895 |
| delta_Rv3717 | 0.378 | 0.405 |
| delta_Rv3811 | -0.085 | 0.7 |
| delta_Rv0954 | 0.388 | 1.473 |
| PonA1 | 0.293 | -0.118 |
| EccD1_KO | 0.898 | 1.125 |
| EspI_KO | 1.78 | 3.434 |
| PE35_KO | 0.335 | 1.114 |
| PPE68_KO | 0.71 | 2.857 |
| glycerol2 | -0.062 | -0.031 |
| lignocerate | 0.027 | 0.105 |
| oleate | 0.394 | -0.537 |
| phosphatidylcholine | 0.176 | -0.063 |
| acetate | -0.437 | 0.178 |
| glucAc | -0.385 | 0.213 |
| Rv0950ko | 0.262 | 0.193 |
| Rv1096ko | 1.384 | -0.16 |
| Rv3684ko | 0.144 | -0.085 |
| delta_otsA_trehalose | 1.645 | 1.489 |