Top 10 genes with highest correlation to Rv2784c/lppU:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0910/- | (cc=0.6227) | info on Rv0910/- |
| Rv1539/lspA | (cc=0.614) | info on Rv1539/lspA |
| Rv2681/- | (cc=0.6116) | info on Rv2681/- |
| Rv1140/- | (cc=0.5818) | info on Rv1140/- |
| Rv2564/glnQ | (cc=0.5691) | info on Rv2564/glnQ |
| Rv3482c/- | (cc=0.5611) | info on Rv3482c/- |
| Rv2563/- | (cc=0.5599) | info on Rv2563/- |
| Rv3651/- | (cc=0.5543) | info on Rv3651/- |
| Rv1323/fadA4 | (cc=0.552) | info on Rv1323/fadA4 |
| Rv0561c/- | (cc=0.5508) | info on Rv0561c/- |
Correlation of Rv2784c/lppU with Rv3482c/-
Normalized LFCs for Rv2784c/lppU:
(description and provenance of datasets)
| Rv2784c/lppU | Rv3482c/- | |
| Fe_supp_jason_reseq | 1.512 | 0.543 |
| low_pH_jason_reseq | -0.428 | -1.541 |
| NO_jason_reseq | -0.709 | -0.218 |
| B6_jason_reseq | -0.669 | 0.878 |
| MHCII_jason_reseq | 0.497 | 1.276 |
| Isoniazid02 | 0.84 | 0.618 |
| Rifampicin4 | -1.356 | 0.079 |
| Ethambutol3 | 1.155 | 1.654 |
| Meropenem3 | 0.582 | 0.551 |
| Vancomycin16 | 0.186 | 0.56 |
| Rv2680_day32 | -0.617 | -0.738 |
| H37Rv_KO_MarP | 2.004 | 0.226 |
| hypoxia_3wks | 0.375 | -0.323 |
| hypoxia_6wks | -1.105 | 0.106 |
| glycerol | 0.259 | 0.177 |
| cholesterol | 0.256 | -0.377 |
| AJ | -0.008 | -0.928 |
| Bibs02 | 0.286 | 0.008 |
| Bibs02c | 0.218 | 0.291 |
| BL6 | -1.188 | -0.82 |
| BL6a | -0.192 | -0.484 |
| BXD01 | -0.88 | -0.936 |
| BXD010 | -1.691 | -1.38 |
| BXD011 | -1.875 | -1.176 |
| BXD03 | -1.786 | -0.528 |
| BXD04 | -0.9 | -0.672 |
| BXD05 | -2.264 | -0.741 |
| BXD06 | -2.059 | -1.019 |
| BXD07 | -1.326 | -0.989 |
| BXD08 | -1.004 | -1.268 |
| BXD09 | -1.159 | -0.954 |
| CAST | -1.308 | -1.069 |
| CCcont | -0.195 | -0.282 |
| DS01 | 0.814 | 0.118 |
| DS02 | 0.438 | -0.013 |
| DS04 | 1.552 | 0.195 |
| DS0c | 0.695 | 0.437 |
| GP01 | -0.996 | -1.843 |
| GP02 | 0.519 | -1.339 |
| GP0c | -1.203 | -1.004 |
| NOD | 0.073 | 0.133 |
| NZO | -0.053 | -1.063 |
| PWK | -0.783 | -0.561 |
| H37Rv_KO_CtpC | -0.579 | -1.153 |
| H37Rv_KO_CtpD | -0.896 | -0.654 |
| H37Rv_KO_Rv1272 | -0.4 | -1.053 |
| H37Rv_KO_SugABC | -0.191 | -0.183 |
| H37Rv_KO_MbtN | -0.828 | -0.656 |
| Trans05 | -2.359 | -0.866 |
| macrophage_unactivated | 0.612 | -0.357 |
| IL1 | -0.234 | -0.3 |
| Rapamycin | 0.654 | 0.261 |
| Tcell | -0.218 | -0.052 |
| GMCSF | -0.428 | 0.209 |
| IFNab | -0.998 | -0.342 |
| IFNg | -0.211 | -0.013 |
| IFNg_GMCSF1 | -1.395 | -0.016 |
| Rv1432_day32 | -1.241 | -0.18 |
| Rv1565c_day32 | 0.25 | -0.313 |
| secA2_input | 1.176 | 0.304 |
| delta_Rv3594 | 0.411 | 0.381 |
| delta_Rv3717 | -1.026 | 0.235 |
| delta_Rv3811 | 0.589 | 0.128 |
| delta_Rv0954 | 0.504 | -0.08 |
| PonA1 | 2.124 | 0.578 |
| EccD1_KO | 0.187 | -0.171 |
| EspI_KO | 0.502 | -0.148 |
| PE35_KO | 1.003 | -0.28 |
| PPE68_KO | 0.291 | 0.08 |
| glycerol2 | 0.217 | 0.846 |
| lignocerate | 0.564 | 1.085 |
| oleate | 0.489 | 0.096 |
| phosphatidylcholine | 1.31 | 1.088 |
| acetate | -0.643 | 0.316 |
| glucAc | -0.852 | 0.38 |
| Rv0950ko | -0.947 | 0.458 |
| Rv1096ko | -0.694 | 0.157 |
| Rv3684ko | -1.32 | -0.491 |
| delta_otsA_trehalose | -0.019 | -1.133 |