Top 10 genes with highest correlation to Rv2784c/lppU:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0910/- | (cc=0.6227) | info on Rv0910/- |
| Rv1539/lspA | (cc=0.614) | info on Rv1539/lspA |
| Rv2681/- | (cc=0.6116) | info on Rv2681/- |
| Rv1140/- | (cc=0.5818) | info on Rv1140/- |
| Rv2564/glnQ | (cc=0.5691) | info on Rv2564/glnQ |
| Rv3482c/- | (cc=0.5611) | info on Rv3482c/- |
| Rv2563/- | (cc=0.5599) | info on Rv2563/- |
| Rv3651/- | (cc=0.5543) | info on Rv3651/- |
| Rv1323/fadA4 | (cc=0.552) | info on Rv1323/fadA4 |
| Rv0561c/- | (cc=0.5508) | info on Rv0561c/- |
Correlation of Rv2784c/lppU with Rv2563/-
Normalized LFCs for Rv2784c/lppU:
(description and provenance of datasets)
| Rv2784c/lppU | Rv2563/- | |
| Fe_supp_jason_reseq | 1.512 | 1.514 |
| low_pH_jason_reseq | -0.428 | 0.0 |
| NO_jason_reseq | -0.709 | -4.161 |
| B6_jason_reseq | -0.669 | -2.7 |
| MHCII_jason_reseq | 0.497 | -2.378 |
| Isoniazid02 | 0.84 | 0.677 |
| Rifampicin4 | -1.356 | -1.868 |
| Ethambutol3 | 1.155 | 2.152 |
| Meropenem3 | 0.582 | -1.269 |
| Vancomycin16 | 0.186 | -0.488 |
| Rv2680_day32 | -0.617 | -1.894 |
| H37Rv_KO_MarP | 2.004 | 0.364 |
| hypoxia_3wks | 0.375 | -2.939 |
| hypoxia_6wks | -1.105 | -3.627 |
| glycerol | 0.259 | 1.156 |
| cholesterol | 0.256 | 0.46 |
| AJ | -0.008 | -4.323 |
| Bibs02 | 0.286 | -0.13 |
| Bibs02c | 0.218 | -0.149 |
| BL6 | -1.188 | -2.974 |
| BL6a | -0.192 | -1.34 |
| BXD01 | -0.88 | -3.227 |
| BXD010 | -1.691 | -3.045 |
| BXD011 | -1.875 | -2.167 |
| BXD03 | -1.786 | -2.443 |
| BXD04 | -0.9 | -2.94 |
| BXD05 | -2.264 | -3.2 |
| BXD06 | -2.059 | -3.307 |
| BXD07 | -1.326 | -3.167 |
| BXD08 | -1.004 | -3.162 |
| BXD09 | -1.159 | -3.341 |
| CAST | -1.308 | -2.194 |
| CCcont | -0.195 | -0.754 |
| DS01 | 0.814 | 1.932 |
| DS02 | 0.438 | 1.281 |
| DS04 | 1.552 | 1.206 |
| DS0c | 0.695 | 1.634 |
| GP01 | -0.996 | -2.446 |
| GP02 | 0.519 | -2.061 |
| GP0c | -1.203 | -3.221 |
| NOD | 0.073 | -0.898 |
| NZO | -0.053 | -3.835 |
| PWK | -0.783 | 0.665 |
| H37Rv_KO_CtpC | -0.579 | -1.997 |
| H37Rv_KO_CtpD | -0.896 | -1.089 |
| H37Rv_KO_Rv1272 | -0.4 | -1.451 |
| H37Rv_KO_SugABC | -0.191 | -1.736 |
| H37Rv_KO_MbtN | -0.828 | -2.191 |
| Trans05 | -2.359 | -2.988 |
| macrophage_unactivated | 0.612 | 1.411 |
| IL1 | -0.234 | -1.64 |
| Rapamycin | 0.654 | -0.651 |
| Tcell | -0.218 | -1.212 |
| GMCSF | -0.428 | -1.212 |
| IFNab | -0.998 | 0.729 |
| IFNg | -0.211 | -2.028 |
| IFNg_GMCSF1 | -1.395 | -0.434 |
| Rv1432_day32 | -1.241 | -0.884 |
| Rv1565c_day32 | 0.25 | 2.504 |
| secA2_input | 1.176 | 0.127 |
| delta_Rv3594 | 0.411 | -2.496 |
| delta_Rv3717 | -1.026 | -2.054 |
| delta_Rv3811 | 0.589 | -2.427 |
| delta_Rv0954 | 0.504 | 2.344 |
| PonA1 | 2.124 | 2.92 |
| EccD1_KO | 0.187 | -0.743 |
| EspI_KO | 0.502 | 1.395 |
| PE35_KO | 1.003 | 2.013 |
| PPE68_KO | 0.291 | 1.67 |
| glycerol2 | 0.217 | -3.095 |
| lignocerate | 0.564 | -1.315 |
| oleate | 0.489 | -3.265 |
| phosphatidylcholine | 1.31 | -1.693 |
| acetate | -0.643 | -0.893 |
| glucAc | -0.852 | -0.881 |
| Rv0950ko | -0.947 | 0.841 |
| Rv1096ko | -0.694 | 1.013 |
| Rv3684ko | -1.32 | -0.079 |
| delta_otsA_trehalose | -0.019 | -1.192 |