Top 10 genes with highest correlation to Rv2715/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2394/ggtB | (cc=0.6425) | info on Rv2394/ggtB |
Rv0338c/- | (cc=0.5414) | info on Rv0338c/- |
Rv2268c/cyp128 | (cc=0.4909) | info on Rv2268c/cyp128 |
Rv2189c/- | (cc=0.4775) | info on Rv2189c/- |
Rv0373c/- | (cc=0.4709) | info on Rv0373c/- |
Rv1317c/alkA | (cc=0.4611) | info on Rv1317c/alkA |
Rv3730c/- | (cc=0.4507) | info on Rv3730c/- |
Rv0069c/sdaA | (cc=0.4477) | info on Rv0069c/sdaA |
Rv2962c/- | (cc=0.437) | info on Rv2962c/- |
Rv0797/- | (cc=0.4327) | info on Rv0797/- |
Correlation of Rv2715/- with Rv1317c/alkA
Normalized LFCs for Rv2715/-:
(description and provenance of datasets)
Rv2715/- | Rv1317c/alkA | |
Fe_supp_jason_reseq | -0.508 | -0.628 |
low_pH_jason_reseq | 0.796 | -1.337 |
NO_jason_reseq | -0.646 | -0.711 |
B6_jason_reseq | -0.542 | -0.498 |
MHCII_jason_reseq | 0.346 | -0.365 |
Isoniazid02 | 1.224 | 1.264 |
Rifampicin4 | -0.504 | 0.062 |
Ethambutol3 | 2.932 | 1.267 |
Meropenem3 | 2.498 | 0.236 |
Vancomycin16 | 0.0 | 0.297 |
Rv2680_day32 | -0.73 | 0.21 |
H37Rv_KO_MarP | 0.223 | 0.353 |
hypoxia_3wks | -0.116 | 0.132 |
hypoxia_6wks | 0.175 | 0.086 |
glycerol | -0.471 | -0.377 |
cholesterol | 4.799 | 1.811 |
AJ | -0.024 | -0.281 |
Bibs02 | -0.223 | -0.342 |
Bibs02c | 1.516 | 0.867 |
BL6 | 0.26 | -0.792 |
BL6a | 1.24 | 0.423 |
BXD01 | 0.314 | -0.77 |
BXD010 | 1.166 | -0.141 |
BXD011 | 0.642 | -0.328 |
BXD03 | 0.349 | -0.599 |
BXD04 | 0.809 | -0.156 |
BXD05 | 0.369 | -0.677 |
BXD06 | 0.366 | 0.156 |
BXD07 | 0.357 | -0.259 |
BXD08 | 0.448 | 0.103 |
BXD09 | 0.788 | -0.458 |
CAST | -0.28 | -0.47 |
CCcont | 0.348 | -0.973 |
DS01 | 0.429 | -0.4 |
DS02 | 0.132 | -0.917 |
DS04 | 0.682 | 0.252 |
DS0c | 0.046 | -0.127 |
GP01 | 0.804 | -1.167 |
GP02 | 0.516 | 0.142 |
GP0c | 0.387 | -0.98 |
NOD | 1.787 | -0.155 |
NZO | -0.964 | -0.241 |
PWK | 0.158 | 0.45 |
H37Rv_KO_CtpC | 0.607 | -0.639 |
H37Rv_KO_CtpD | 0.185 | -0.759 |
H37Rv_KO_Rv1272 | 0.558 | -1.334 |
H37Rv_KO_SugABC | 0.898 | -0.141 |
H37Rv_KO_MbtN | 1.101 | -0.518 |
Trans05 | 1.278 | 0.096 |
macrophage_unactivated | 0.3 | -0.71 |
IL1 | -0.065 | -0.332 |
Rapamycin | 0.353 | 0.129 |
Tcell | 0.176 | -0.313 |
GMCSF | -0.148 | 0.222 |
IFNab | -0.133 | -0.178 |
IFNg | 0.644 | 0.486 |
IFNg_GMCSF1 | -0.358 | -0.424 |
Rv1432_day32 | -0.499 | 0.368 |
Rv1565c_day32 | -0.655 | -0.393 |
secA2_input | -0.11 | 0.387 |
delta_Rv3594 | 0.728 | -0.489 |
delta_Rv3717 | 0.151 | -0.148 |
delta_Rv3811 | 1.169 | 0.064 |
delta_Rv0954 | 0.783 | -0.012 |
PonA1 | 0.386 | -0.965 |
EccD1_KO | 1.095 | -0.105 |
EspI_KO | 0.95 | -0.448 |
PE35_KO | 1.476 | 0.0 |
PPE68_KO | 0.784 | -0.179 |
glycerol2 | -0.476 | -0.454 |
lignocerate | 0.102 | -0.369 |
oleate | -0.216 | -0.096 |
phosphatidylcholine | 0.0 | -0.368 |
acetate | 0.206 | -1.122 |
glucAc | 0.481 | -0.605 |
Rv0950ko | -0.109 | -0.618 |
Rv1096ko | -0.145 | -0.118 |
Rv3684ko | -0.318 | -0.154 |
delta_otsA_trehalose | 0.879 | -0.113 |