Top 10 genes with highest correlation to Rv2656c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2330c/lppP | (cc=0.566) | info on Rv2330c/lppP |
| Rv2118c/- | (cc=0.5592) | info on Rv2118c/- |
| Rv2723/- | (cc=0.5565) | info on Rv2723/- |
| Rv0814c/sseC2 | (cc=0.5387) | info on Rv0814c/sseC2 |
| Rv1072/- | (cc=0.5011) | info on Rv1072/- |
| Rv0823c/- | (cc=0.4983) | info on Rv0823c/- |
| Rv3419c/gcp | (cc=0.4946) | info on Rv3419c/gcp |
| Rv2161c/- | (cc=0.4783) | info on Rv2161c/- |
| Rv2500c/fadE19 | (cc=0.475) | info on Rv2500c/fadE19 |
| Rv2398c/cysW | (cc=0.4733) | info on Rv2398c/cysW |
Correlation of Rv2656c/- with Rv3419c/gcp
Normalized LFCs for Rv2656c/-:
(description and provenance of datasets)
| Rv2656c/- | Rv3419c/gcp | |
| Fe_supp_jason_reseq | -0.043 | -1.455 |
| low_pH_jason_reseq | 0.045 | 0.353 |
| NO_jason_reseq | 1.738 | 3.179 |
| B6_jason_reseq | 1.599 | 0.578 |
| MHCII_jason_reseq | 0.99 | -1.332 |
| Isoniazid02 | 0.354 | -1.685 |
| Rifampicin4 | 0.39 | 0.845 |
| Ethambutol3 | 2.977 | 1.389 |
| Meropenem3 | 0.139 | 0.0 |
| Vancomycin16 | 0.04 | 0.13 |
| Rv2680_day32 | 0.658 | -0.811 |
| H37Rv_KO_MarP | 0.107 | -0.44 |
| hypoxia_3wks | -0.801 | 0.0 |
| hypoxia_6wks | 0.121 | 0.0 |
| glycerol | 1.04 | -0.083 |
| cholesterol | 0.209 | -1.447 |
| AJ | 1.768 | 1.536 |
| Bibs02 | 0.042 | -0.703 |
| Bibs02c | -0.221 | -0.467 |
| BL6 | 0.18 | 2.916 |
| BL6a | 0.573 | 1.474 |
| BXD01 | 1.882 | 2.919 |
| BXD010 | 1.409 | 2.677 |
| BXD011 | 2.756 | 3.476 |
| BXD03 | 1.517 | 3.152 |
| BXD04 | 2.194 | 3.199 |
| BXD05 | 2.084 | 2.698 |
| BXD06 | 1.44 | 3.834 |
| BXD07 | 1.547 | 2.848 |
| BXD08 | 1.072 | 3.06 |
| BXD09 | 1.736 | 2.295 |
| CAST | 3.48 | 2.279 |
| CCcont | 0.606 | 2.265 |
| DS01 | 0.108 | -0.775 |
| DS02 | 0.099 | -0.181 |
| DS04 | 1.158 | 0.873 |
| DS0c | 1.023 | -0.278 |
| GP01 | -0.707 | -0.888 |
| GP02 | -1.661 | -0.831 |
| GP0c | -0.291 | 0.775 |
| NOD | 1.103 | 1.01 |
| NZO | 1.699 | 1.777 |
| PWK | 1.8 | 3.711 |
| H37Rv_KO_CtpC | 2.318 | 1.272 |
| H37Rv_KO_CtpD | 1.646 | 2.089 |
| H37Rv_KO_Rv1272 | 1.626 | 0.993 |
| H37Rv_KO_SugABC | 1.237 | 1.521 |
| H37Rv_KO_MbtN | -0.55 | 1.977 |
| Trans05 | 2.493 | 1.517 |
| macrophage_unactivated | 0.347 | -1.045 |
| IL1 | 1.593 | -0.715 |
| Rapamycin | 0.534 | -1.795 |
| Tcell | 0.541 | 0.349 |
| GMCSF | 0.158 | -1.127 |
| IFNab | 1.058 | 0.813 |
| IFNg | 1.371 | -1.141 |
| IFNg_GMCSF1 | 1.207 | -1.191 |
| Rv1432_day32 | 0.207 | -0.395 |
| Rv1565c_day32 | 0.054 | -0.262 |
| secA2_input | 1.119 | -0.163 |
| delta_Rv3594 | -0.974 | 0.598 |
| delta_Rv3717 | -1.013 | 0.992 |
| delta_Rv3811 | -1.423 | 0.949 |
| delta_Rv0954 | -0.204 | -0.774 |
| PonA1 | -0.652 | 0.121 |
| EccD1_KO | 2.345 | 0.368 |
| EspI_KO | 0.416 | -1.229 |
| PE35_KO | 0.201 | -0.353 |
| PPE68_KO | 1.449 | -0.307 |
| glycerol2 | -0.168 | -1.808 |
| lignocerate | 0.472 | -1.93 |
| oleate | -0.841 | -1.829 |
| phosphatidylcholine | 0.123 | -2.043 |
| acetate | 0.806 | -1.453 |
| glucAc | 0.641 | 1.045 |
| Rv0950ko | -0.259 | 0.419 |
| Rv1096ko | -1.258 | -0.259 |
| Rv3684ko | -1.087 | 1.15 |
| delta_otsA_trehalose | 0.114 | 0.965 |