Top 10 genes with highest correlation to Rv2656c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2330c/lppP | (cc=0.566) | info on Rv2330c/lppP |
| Rv2118c/- | (cc=0.5592) | info on Rv2118c/- |
| Rv2723/- | (cc=0.5565) | info on Rv2723/- |
| Rv0814c/sseC2 | (cc=0.5387) | info on Rv0814c/sseC2 |
| Rv1072/- | (cc=0.5011) | info on Rv1072/- |
| Rv0823c/- | (cc=0.4983) | info on Rv0823c/- |
| Rv3419c/gcp | (cc=0.4946) | info on Rv3419c/gcp |
| Rv2161c/- | (cc=0.4783) | info on Rv2161c/- |
| Rv2500c/fadE19 | (cc=0.475) | info on Rv2500c/fadE19 |
| Rv2398c/cysW | (cc=0.4733) | info on Rv2398c/cysW |
Correlation of Rv2656c/- with Rv2398c/cysW
Normalized LFCs for Rv2656c/-:
(description and provenance of datasets)
| Rv2656c/- | Rv2398c/cysW | |
| Fe_supp_jason_reseq | -0.043 | -0.559 |
| low_pH_jason_reseq | 0.045 | 2.469 |
| NO_jason_reseq | 1.738 | -0.929 |
| B6_jason_reseq | 1.599 | 1.243 |
| MHCII_jason_reseq | 0.99 | -1.175 |
| Isoniazid02 | 0.354 | -0.627 |
| Rifampicin4 | 0.39 | -0.26 |
| Ethambutol3 | 2.977 | 0.263 |
| Meropenem3 | 0.139 | -0.593 |
| Vancomycin16 | 0.04 | 0.239 |
| Rv2680_day32 | 0.658 | 0.0 |
| H37Rv_KO_MarP | 0.107 | -1.317 |
| hypoxia_3wks | -0.801 | -0.371 |
| hypoxia_6wks | 0.121 | 1.462 |
| glycerol | 1.04 | 0.709 |
| cholesterol | 0.209 | 0.0 |
| AJ | 1.768 | 0.637 |
| Bibs02 | 0.042 | 0.0 |
| Bibs02c | -0.221 | 0.0 |
| BL6 | 0.18 | 0.125 |
| BL6a | 0.573 | 0.696 |
| BXD01 | 1.882 | 2.505 |
| BXD010 | 1.409 | 0.543 |
| BXD011 | 2.756 | 0.243 |
| BXD03 | 1.517 | 1.687 |
| BXD04 | 2.194 | 2.08 |
| BXD05 | 2.084 | 1.109 |
| BXD06 | 1.44 | 1.898 |
| BXD07 | 1.547 | 1.003 |
| BXD08 | 1.072 | 3.201 |
| BXD09 | 1.736 | 0.943 |
| CAST | 3.48 | 2.563 |
| CCcont | 0.606 | 0.829 |
| DS01 | 0.108 | 0.0 |
| DS02 | 0.099 | 0.0 |
| DS04 | 1.158 | 0.0 |
| DS0c | 1.023 | 0.596 |
| GP01 | -0.707 | 0.0 |
| GP02 | -1.661 | 0.0 |
| GP0c | -0.291 | 0.248 |
| NOD | 1.103 | 1.507 |
| NZO | 1.699 | 0.199 |
| PWK | 1.8 | 0.196 |
| H37Rv_KO_CtpC | 2.318 | 0.309 |
| H37Rv_KO_CtpD | 1.646 | 0.241 |
| H37Rv_KO_Rv1272 | 1.626 | 0.0 |
| H37Rv_KO_SugABC | 1.237 | 0.099 |
| H37Rv_KO_MbtN | -0.55 | 0.633 |
| Trans05 | 2.493 | 3.198 |
| macrophage_unactivated | 0.347 | -0.761 |
| IL1 | 1.593 | -1.124 |
| Rapamycin | 0.534 | -0.74 |
| Tcell | 0.541 | -0.785 |
| GMCSF | 0.158 | -1.001 |
| IFNab | 1.058 | 0.623 |
| IFNg | 1.371 | -1.013 |
| IFNg_GMCSF1 | 1.207 | -0.757 |
| Rv1432_day32 | 0.207 | 0.0 |
| Rv1565c_day32 | 0.054 | 0.0 |
| secA2_input | 1.119 | -2.027 |
| delta_Rv3594 | -0.974 | -1.689 |
| delta_Rv3717 | -1.013 | -2.648 |
| delta_Rv3811 | -1.423 | -4.054 |
| delta_Rv0954 | -0.204 | -1.902 |
| PonA1 | -0.652 | -2.428 |
| EccD1_KO | 2.345 | -3.147 |
| EspI_KO | 0.416 | -3.246 |
| PE35_KO | 0.201 | 2.374 |
| PPE68_KO | 1.449 | 0.653 |
| glycerol2 | -0.168 | -2.028 |
| lignocerate | 0.472 | -1.469 |
| oleate | -0.841 | -1.874 |
| phosphatidylcholine | 0.123 | -1.689 |
| acetate | 0.806 | -0.637 |
| glucAc | 0.641 | -1.034 |
| Rv0950ko | -0.259 | -2.527 |
| Rv1096ko | -1.258 | -1.915 |
| Rv3684ko | -1.087 | -1.955 |
| delta_otsA_trehalose | 0.114 | 1.3 |