Top 10 genes with highest correlation to Rv2656c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2330c/lppP | (cc=0.566) | info on Rv2330c/lppP |
| Rv2118c/- | (cc=0.5592) | info on Rv2118c/- |
| Rv2723/- | (cc=0.5565) | info on Rv2723/- |
| Rv0814c/sseC2 | (cc=0.5387) | info on Rv0814c/sseC2 |
| Rv1072/- | (cc=0.5011) | info on Rv1072/- |
| Rv0823c/- | (cc=0.4983) | info on Rv0823c/- |
| Rv3419c/gcp | (cc=0.4946) | info on Rv3419c/gcp |
| Rv2161c/- | (cc=0.4783) | info on Rv2161c/- |
| Rv2500c/fadE19 | (cc=0.475) | info on Rv2500c/fadE19 |
| Rv2398c/cysW | (cc=0.4733) | info on Rv2398c/cysW |
Correlation of Rv2656c/- with Rv2723/-
Normalized LFCs for Rv2656c/-:
(description and provenance of datasets)
| Rv2656c/- | Rv2723/- | |
| Fe_supp_jason_reseq | -0.043 | -0.882 |
| low_pH_jason_reseq | 0.045 | -0.838 |
| NO_jason_reseq | 1.738 | 1.344 |
| B6_jason_reseq | 1.599 | -1.475 |
| MHCII_jason_reseq | 0.99 | -1.556 |
| Isoniazid02 | 0.354 | -0.224 |
| Rifampicin4 | 0.39 | -0.504 |
| Ethambutol3 | 2.977 | 0.815 |
| Meropenem3 | 0.139 | -1.035 |
| Vancomycin16 | 0.04 | -1.005 |
| Rv2680_day32 | 0.658 | -1.107 |
| H37Rv_KO_MarP | 0.107 | -0.309 |
| hypoxia_3wks | -0.801 | -1.3 |
| hypoxia_6wks | 0.121 | -0.965 |
| glycerol | 1.04 | -0.434 |
| cholesterol | 0.209 | -1.074 |
| AJ | 1.768 | 0.311 |
| Bibs02 | 0.042 | -1.155 |
| Bibs02c | -0.221 | -1.366 |
| BL6 | 0.18 | 0.223 |
| BL6a | 0.573 | -0.344 |
| BXD01 | 1.882 | 0.037 |
| BXD010 | 1.409 | 0.773 |
| BXD011 | 2.756 | 0.488 |
| BXD03 | 1.517 | 0.712 |
| BXD04 | 2.194 | 0.916 |
| BXD05 | 2.084 | 0.741 |
| BXD06 | 1.44 | 1.031 |
| BXD07 | 1.547 | 0.547 |
| BXD08 | 1.072 | 0.275 |
| BXD09 | 1.736 | 0.745 |
| CAST | 3.48 | 0.936 |
| CCcont | 0.606 | 0.075 |
| DS01 | 0.108 | -1.619 |
| DS02 | 0.099 | -0.759 |
| DS04 | 1.158 | -0.572 |
| DS0c | 1.023 | -0.723 |
| GP01 | -0.707 | -1.021 |
| GP02 | -1.661 | 0.354 |
| GP0c | -0.291 | -0.444 |
| NOD | 1.103 | 0.973 |
| NZO | 1.699 | 0.692 |
| PWK | 1.8 | 1.432 |
| H37Rv_KO_CtpC | 2.318 | 0.845 |
| H37Rv_KO_CtpD | 1.646 | 1.413 |
| H37Rv_KO_Rv1272 | 1.626 | 0.224 |
| H37Rv_KO_SugABC | 1.237 | -0.133 |
| H37Rv_KO_MbtN | -0.55 | -0.402 |
| Trans05 | 2.493 | 0.415 |
| macrophage_unactivated | 0.347 | -0.322 |
| IL1 | 1.593 | -0.122 |
| Rapamycin | 0.534 | -1.04 |
| Tcell | 0.541 | 0.186 |
| GMCSF | 0.158 | 0.032 |
| IFNab | 1.058 | -0.502 |
| IFNg | 1.371 | 0.655 |
| IFNg_GMCSF1 | 1.207 | 0.581 |
| Rv1432_day32 | 0.207 | -1.967 |
| Rv1565c_day32 | 0.054 | -0.798 |
| secA2_input | 1.119 | 0.333 |
| delta_Rv3594 | -0.974 | -1.361 |
| delta_Rv3717 | -1.013 | -2.117 |
| delta_Rv3811 | -1.423 | -1.966 |
| delta_Rv0954 | -0.204 | 0.142 |
| PonA1 | -0.652 | 0.297 |
| EccD1_KO | 2.345 | 0.0 |
| EspI_KO | 0.416 | 0.157 |
| PE35_KO | 0.201 | -0.388 |
| PPE68_KO | 1.449 | -0.115 |
| glycerol2 | -0.168 | -0.13 |
| lignocerate | 0.472 | -0.628 |
| oleate | -0.841 | 0.641 |
| phosphatidylcholine | 0.123 | 0.773 |
| acetate | 0.806 | -0.263 |
| glucAc | 0.641 | -0.396 |
| Rv0950ko | -0.259 | 0.22 |
| Rv1096ko | -1.258 | -1.071 |
| Rv3684ko | -1.087 | -0.134 |
| delta_otsA_trehalose | 0.114 | 1.112 |