Top 10 genes with highest correlation to Rv2604c/snoP:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1568/bioA | (cc=0.7576) | info on Rv1568/bioA |
| Rv1589/bioB | (cc=0.7447) | info on Rv1589/bioB |
| Rv1590/- | (cc=0.7222) | info on Rv1590/- |
| Rv1569/bioF1 | (cc=0.7195) | info on Rv1569/bioF1 |
| Rv2606c/snzP | (cc=0.7184) | info on Rv2606c/snzP |
| Rv3616c/espA | (cc=0.7145) | info on Rv3616c/espA |
| Rv3544c/fadE28 | (cc=0.7145) | info on Rv3544c/fadE28 |
| Rv2605c/tesB2 | (cc=0.7088) | info on Rv2605c/tesB2 |
| Rv3870/eccCa1 | (cc=0.7081) | info on Rv3870/eccCa1 |
| Rv3869/eccB1 | (cc=0.6924) | info on Rv3869/eccB1 |
Correlation of Rv2604c/snoP with Rv3869/eccB1
Normalized LFCs for Rv2604c/snoP:
(description and provenance of datasets)
| Rv2604c/snoP | Rv3869/eccB1 | |
| Fe_supp_jason_reseq | -1.279 | -0.595 |
| low_pH_jason_reseq | 0.94 | -1.504 |
| NO_jason_reseq | -0.244 | -0.517 |
| B6_jason_reseq | -4.081 | -3.095 |
| MHCII_jason_reseq | -3.594 | -3.051 |
| Isoniazid02 | 0.998 | 0.301 |
| Rifampicin4 | 0.509 | -0.379 |
| Ethambutol3 | -0.263 | 2.148 |
| Meropenem3 | -0.092 | 1.319 |
| Vancomycin16 | 0.806 | 0.231 |
| Rv2680_day32 | 0.0 | -2.152 |
| H37Rv_KO_MarP | -0.61 | 1.091 |
| hypoxia_3wks | 0.566 | -0.14 |
| hypoxia_6wks | -0.741 | -0.276 |
| glycerol | -4.362 | -0.376 |
| cholesterol | -3.129 | 0.317 |
| AJ | -5.012 | -5.94 |
| Bibs02 | -3.95 | -6.0 |
| Bibs02c | -4.52 | -3.504 |
| BL6 | -2.702 | -2.513 |
| BL6a | -4.081 | -3.579 |
| BXD01 | -2.262 | -3.629 |
| BXD010 | -1.711 | -3.073 |
| BXD011 | -2.752 | -3.299 |
| BXD03 | -2.921 | -3.502 |
| BXD04 | -2.548 | -2.55 |
| BXD05 | -2.773 | -3.799 |
| BXD06 | -2.75 | -3.819 |
| BXD07 | -2.727 | -3.254 |
| BXD08 | -2.873 | -3.805 |
| BXD09 | -2.65 | -4.193 |
| CAST | -4.343 | -4.92 |
| CCcont | -0.211 | -1.079 |
| DS01 | -5.102 | -4.336 |
| DS02 | -4.698 | -3.929 |
| DS04 | -3.238 | -2.034 |
| DS0c | -4.686 | -4.552 |
| GP01 | -2.133 | -2.946 |
| GP02 | -1.797 | -2.891 |
| GP0c | -2.01 | -1.04 |
| NOD | -4.852 | -1.808 |
| NZO | -4.309 | -5.557 |
| PWK | -3.406 | -5.201 |
| H37Rv_KO_CtpC | -3.2 | -1.915 |
| H37Rv_KO_CtpD | -1.421 | -1.944 |
| H37Rv_KO_Rv1272 | -3.046 | -2.651 |
| H37Rv_KO_SugABC | 0.415 | -0.819 |
| H37Rv_KO_MbtN | -2.03 | 0.476 |
| Trans05 | -2.823 | -1.832 |
| macrophage_unactivated | -0.114 | -0.978 |
| IL1 | 0.071 | -0.169 |
| Rapamycin | 0.107 | 0.249 |
| Tcell | 0.411 | -1.571 |
| GMCSF | 0.359 | 0.504 |
| IFNab | 0.574 | 1.835 |
| IFNg | -0.51 | -1.358 |
| IFNg_GMCSF1 | -0.352 | -1.012 |
| Rv1432_day32 | 0.0 | -1.288 |
| Rv1565c_day32 | 0.0 | -2.783 |
| secA2_input | 0.65 | 0.412 |
| delta_Rv3594 | -0.263 | 0.451 |
| delta_Rv3717 | -0.104 | -0.084 |
| delta_Rv3811 | 0.763 | 0.256 |
| delta_Rv0954 | -2.605 | 0.464 |
| PonA1 | -1.332 | -0.225 |
| EccD1_KO | 1.519 | 0.125 |
| EspI_KO | 2.236 | -0.046 |
| PE35_KO | 1.683 | -0.015 |
| PPE68_KO | 1.014 | -0.253 |
| glycerol2 | -2.418 | 0.156 |
| lignocerate | -2.102 | 0.488 |
| oleate | -3.199 | -0.071 |
| phosphatidylcholine | -1.385 | 0.49 |
| acetate | -2.002 | 0.401 |
| glucAc | -1.538 | 0.092 |
| Rv0950ko | 0.513 | 0.193 |
| Rv1096ko | 1.855 | -0.283 |
| Rv3684ko | 0.684 | 0.635 |
| delta_otsA_trehalose | 0.637 | -0.181 |