Top 10 genes with highest correlation to Rv2604c/snoP:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1568/bioA | (cc=0.7576) | info on Rv1568/bioA |
| Rv1589/bioB | (cc=0.7447) | info on Rv1589/bioB |
| Rv1590/- | (cc=0.7222) | info on Rv1590/- |
| Rv1569/bioF1 | (cc=0.7195) | info on Rv1569/bioF1 |
| Rv2606c/snzP | (cc=0.7184) | info on Rv2606c/snzP |
| Rv3616c/espA | (cc=0.7145) | info on Rv3616c/espA |
| Rv3544c/fadE28 | (cc=0.7145) | info on Rv3544c/fadE28 |
| Rv2605c/tesB2 | (cc=0.7088) | info on Rv2605c/tesB2 |
| Rv3870/eccCa1 | (cc=0.7081) | info on Rv3870/eccCa1 |
| Rv3869/eccB1 | (cc=0.6924) | info on Rv3869/eccB1 |
Correlation of Rv2604c/snoP with Rv1590/-
Normalized LFCs for Rv2604c/snoP:
(description and provenance of datasets)
| Rv2604c/snoP | Rv1590/- | |
| Fe_supp_jason_reseq | -1.279 | 1.809 |
| low_pH_jason_reseq | 0.94 | -2.058 |
| NO_jason_reseq | -0.244 | -0.391 |
| B6_jason_reseq | -4.081 | -5.114 |
| MHCII_jason_reseq | -3.594 | -4.029 |
| Isoniazid02 | 0.998 | -0.288 |
| Rifampicin4 | 0.509 | -0.273 |
| Ethambutol3 | -0.263 | 0.114 |
| Meropenem3 | -0.092 | 0.156 |
| Vancomycin16 | 0.806 | 0.462 |
| Rv2680_day32 | 0.0 | -4.076 |
| H37Rv_KO_MarP | -0.61 | -0.391 |
| hypoxia_3wks | 0.566 | 0.598 |
| hypoxia_6wks | -0.741 | -0.18 |
| glycerol | -4.362 | -6.0 |
| cholesterol | -3.129 | -4.706 |
| AJ | -5.012 | -6.0 |
| Bibs02 | -3.95 | -5.941 |
| Bibs02c | -4.52 | -6.0 |
| BL6 | -2.702 | -3.094 |
| BL6a | -4.081 | -5.463 |
| BXD01 | -2.262 | -3.774 |
| BXD010 | -1.711 | -4.161 |
| BXD011 | -2.752 | -3.691 |
| BXD03 | -2.921 | -4.393 |
| BXD04 | -2.548 | -4.018 |
| BXD05 | -2.773 | -3.329 |
| BXD06 | -2.75 | -4.337 |
| BXD07 | -2.727 | -4.499 |
| BXD08 | -2.873 | -4.321 |
| BXD09 | -2.65 | -4.566 |
| CAST | -4.343 | -5.586 |
| CCcont | -0.211 | 0.202 |
| DS01 | -5.102 | -6.0 |
| DS02 | -4.698 | -6.0 |
| DS04 | -3.238 | -3.596 |
| DS0c | -4.686 | -6.0 |
| GP01 | -2.133 | -2.937 |
| GP02 | -1.797 | -2.475 |
| GP0c | -2.01 | -1.317 |
| NOD | -4.852 | -4.357 |
| NZO | -4.309 | -6.0 |
| PWK | -3.406 | -5.836 |
| H37Rv_KO_CtpC | -3.2 | -4.101 |
| H37Rv_KO_CtpD | -1.421 | -1.658 |
| H37Rv_KO_Rv1272 | -3.046 | -4.196 |
| H37Rv_KO_SugABC | 0.415 | -1.708 |
| H37Rv_KO_MbtN | -2.03 | 0.152 |
| Trans05 | -2.823 | -3.603 |
| macrophage_unactivated | -0.114 | 0.145 |
| IL1 | 0.071 | -0.442 |
| Rapamycin | 0.107 | 2.243 |
| Tcell | 0.411 | 0.241 |
| GMCSF | 0.359 | 0.723 |
| IFNab | 0.574 | 1.36 |
| IFNg | -0.51 | -0.657 |
| IFNg_GMCSF1 | -0.352 | -2.209 |
| Rv1432_day32 | 0.0 | -6.0 |
| Rv1565c_day32 | 0.0 | -6.0 |
| secA2_input | 0.65 | -0.088 |
| delta_Rv3594 | -0.263 | 1.781 |
| delta_Rv3717 | -0.104 | 1.747 |
| delta_Rv3811 | 0.763 | 0.921 |
| delta_Rv0954 | -2.605 | 0.376 |
| PonA1 | -1.332 | 1.032 |
| EccD1_KO | 1.519 | -1.312 |
| EspI_KO | 2.236 | -0.556 |
| PE35_KO | 1.683 | -0.621 |
| PPE68_KO | 1.014 | -1.145 |
| glycerol2 | -2.418 | 0.0 |
| lignocerate | -2.102 | 0.168 |
| oleate | -3.199 | 0.0 |
| phosphatidylcholine | -1.385 | 0.0 |
| acetate | -2.002 | 0.0 |
| glucAc | -1.538 | 1.034 |
| Rv0950ko | 0.513 | -0.651 |
| Rv1096ko | 1.855 | 1.113 |
| Rv3684ko | 0.684 | -0.17 |
| delta_otsA_trehalose | 0.637 | 1.762 |