Top 10 genes with highest correlation to Rv2502c/accD1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3400/- | (cc=0.5386) | info on Rv3400/- |
| Rv2043c/pncA | (cc=0.5045) | info on Rv2043c/pncA |
| Rv3869/eccB1 | (cc=0.4918) | info on Rv3869/eccB1 |
| Rv2859c/- | (cc=0.4817) | info on Rv2859c/- |
| Rv3616c/espA | (cc=0.4779) | info on Rv3616c/espA |
| Rv3614c/espD | (cc=0.4667) | info on Rv3614c/espD |
| Rv3871/eccCb1 | (cc=0.4603) | info on Rv3871/eccCb1 |
| Rv0200/- | (cc=0.4566) | info on Rv0200/- |
| Rv3883c/mycP1 | (cc=0.4528) | info on Rv3883c/mycP1 |
| Rv3870/eccCa1 | (cc=0.4507) | info on Rv3870/eccCa1 |
Correlation of Rv2502c/accD1 with Rv3614c/espD
Normalized LFCs for Rv2502c/accD1:
(description and provenance of datasets)
| Rv2502c/accD1 | Rv3614c/espD | |
| Fe_supp_jason_reseq | -0.709 | -0.587 |
| low_pH_jason_reseq | -0.885 | -0.668 |
| NO_jason_reseq | 0.255 | -0.795 |
| B6_jason_reseq | -0.61 | -2.337 |
| MHCII_jason_reseq | -0.558 | -2.243 |
| Isoniazid02 | 0.071 | 0.007 |
| Rifampicin4 | 0.78 | -0.187 |
| Ethambutol3 | 1.409 | 0.499 |
| Meropenem3 | -0.061 | 0.052 |
| Vancomycin16 | 0.69 | 0.013 |
| Rv2680_day32 | 0.828 | -1.55 |
| H37Rv_KO_MarP | -0.418 | 1.281 |
| hypoxia_3wks | -0.076 | -0.159 |
| hypoxia_6wks | -0.643 | -1.084 |
| glycerol | -0.19 | -1.3 |
| cholesterol | 2.609 | -0.729 |
| AJ | -0.533 | -5.192 |
| Bibs02 | -1.211 | -5.457 |
| Bibs02c | -1.144 | -4.547 |
| BL6 | -0.35 | -1.299 |
| BL6a | -1.171 | -4.873 |
| BXD01 | -0.478 | -2.886 |
| BXD010 | -0.447 | -2.241 |
| BXD011 | -0.356 | -2.548 |
| BXD03 | -0.035 | -2.31 |
| BXD04 | -0.099 | -2.767 |
| BXD05 | 0.1 | -1.613 |
| BXD06 | -0.442 | -2.794 |
| BXD07 | -0.073 | -2.523 |
| BXD08 | -0.417 | -3.347 |
| BXD09 | -0.65 | -3.276 |
| CAST | -0.888 | -3.997 |
| CCcont | -0.25 | -0.378 |
| DS01 | -0.867 | -6.0 |
| DS02 | -0.364 | -6.0 |
| DS04 | -0.898 | -3.847 |
| DS0c | -0.718 | -5.276 |
| GP01 | -1.134 | -1.875 |
| GP02 | -1.591 | -2.344 |
| GP0c | -1.493 | -1.179 |
| NOD | -0.181 | 0.153 |
| NZO | -0.769 | -6.0 |
| PWK | -0.419 | -4.825 |
| H37Rv_KO_CtpC | -0.322 | -1.587 |
| H37Rv_KO_CtpD | -0.333 | -1.102 |
| H37Rv_KO_Rv1272 | 0.281 | -1.097 |
| H37Rv_KO_SugABC | 0.498 | -2.464 |
| H37Rv_KO_MbtN | -0.935 | 0.817 |
| Trans05 | -0.365 | -0.72 |
| macrophage_unactivated | 0.095 | -0.218 |
| IL1 | 0.044 | -0.148 |
| Rapamycin | 0.227 | -0.672 |
| Tcell | 0.196 | -1.235 |
| GMCSF | 0.826 | 0.016 |
| IFNab | -0.484 | 1.128 |
| IFNg | 0.08 | -1.098 |
| IFNg_GMCSF1 | -0.666 | 0.682 |
| Rv1432_day32 | 0.027 | -1.13 |
| Rv1565c_day32 | -1.079 | -3.097 |
| secA2_input | 0.322 | -0.873 |
| delta_Rv3594 | -0.031 | 0.242 |
| delta_Rv3717 | -0.127 | -0.596 |
| delta_Rv3811 | -0.379 | -0.433 |
| delta_Rv0954 | -0.052 | -0.437 |
| PonA1 | -0.983 | -1.641 |
| EccD1_KO | 0.227 | 0.572 |
| EspI_KO | 0.938 | 1.514 |
| PE35_KO | 0.438 | 1.082 |
| PPE68_KO | 0.326 | 1.222 |
| glycerol2 | -0.071 | 1.184 |
| lignocerate | 0.06 | 0.6 |
| oleate | 1.073 | 1.136 |
| phosphatidylcholine | 0.035 | 0.262 |
| acetate | -0.171 | -0.153 |
| glucAc | -0.378 | -0.228 |
| Rv0950ko | 0.256 | 0.485 |
| Rv1096ko | 1.806 | -0.6 |
| Rv3684ko | 0.91 | -0.766 |
| delta_otsA_trehalose | -0.37 | 0.89 |