Top 10 genes with highest correlation to Rv2502c/accD1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3400/- | (cc=0.5386) | info on Rv3400/- |
| Rv2043c/pncA | (cc=0.5045) | info on Rv2043c/pncA |
| Rv3869/eccB1 | (cc=0.4918) | info on Rv3869/eccB1 |
| Rv2859c/- | (cc=0.4817) | info on Rv2859c/- |
| Rv3616c/espA | (cc=0.4779) | info on Rv3616c/espA |
| Rv3614c/espD | (cc=0.4667) | info on Rv3614c/espD |
| Rv3871/eccCb1 | (cc=0.4603) | info on Rv3871/eccCb1 |
| Rv0200/- | (cc=0.4566) | info on Rv0200/- |
| Rv3883c/mycP1 | (cc=0.4528) | info on Rv3883c/mycP1 |
| Rv3870/eccCa1 | (cc=0.4507) | info on Rv3870/eccCa1 |
Correlation of Rv2502c/accD1 with Rv3400/-
Normalized LFCs for Rv2502c/accD1:
(description and provenance of datasets)
| Rv2502c/accD1 | Rv3400/- | |
| Fe_supp_jason_reseq | -0.709 | -0.671 |
| low_pH_jason_reseq | -0.885 | -1.36 |
| NO_jason_reseq | 0.255 | -1.339 |
| B6_jason_reseq | -0.61 | -2.938 |
| MHCII_jason_reseq | -0.558 | -2.903 |
| Isoniazid02 | 0.071 | -1.478 |
| Rifampicin4 | 0.78 | -0.36 |
| Ethambutol3 | 1.409 | 0.038 |
| Meropenem3 | -0.061 | -0.636 |
| Vancomycin16 | 0.69 | -1.409 |
| Rv2680_day32 | 0.828 | -1.829 |
| H37Rv_KO_MarP | -0.418 | -0.254 |
| hypoxia_3wks | -0.076 | -1.049 |
| hypoxia_6wks | -0.643 | -2.021 |
| glycerol | -0.19 | -1.706 |
| cholesterol | 2.609 | -0.947 |
| AJ | -0.533 | -5.607 |
| Bibs02 | -1.211 | -3.776 |
| Bibs02c | -1.144 | -3.052 |
| BL6 | -0.35 | -1.878 |
| BL6a | -1.171 | -2.583 |
| BXD01 | -0.478 | -2.014 |
| BXD010 | -0.447 | -0.889 |
| BXD011 | -0.356 | -1.301 |
| BXD03 | -0.035 | -1.309 |
| BXD04 | -0.099 | -1.613 |
| BXD05 | 0.1 | -2.35 |
| BXD06 | -0.442 | -0.873 |
| BXD07 | -0.073 | -1.806 |
| BXD08 | -0.417 | -2.251 |
| BXD09 | -0.65 | -2.173 |
| CAST | -0.888 | -3.36 |
| CCcont | -0.25 | 0.382 |
| DS01 | -0.867 | -4.878 |
| DS02 | -0.364 | -2.409 |
| DS04 | -0.898 | -1.731 |
| DS0c | -0.718 | -4.04 |
| GP01 | -1.134 | -2.386 |
| GP02 | -1.591 | -2.011 |
| GP0c | -1.493 | -1.365 |
| NOD | -0.181 | 0.462 |
| NZO | -0.769 | -4.82 |
| PWK | -0.419 | -4.367 |
| H37Rv_KO_CtpC | -0.322 | -2.928 |
| H37Rv_KO_CtpD | -0.333 | -1.607 |
| H37Rv_KO_Rv1272 | 0.281 | -1.48 |
| H37Rv_KO_SugABC | 0.498 | -1.158 |
| H37Rv_KO_MbtN | -0.935 | -0.491 |
| Trans05 | -0.365 | -1.408 |
| macrophage_unactivated | 0.095 | -1.054 |
| IL1 | 0.044 | -0.466 |
| Rapamycin | 0.227 | -1.36 |
| Tcell | 0.196 | -1.831 |
| GMCSF | 0.826 | -0.444 |
| IFNab | -0.484 | 0.0 |
| IFNg | 0.08 | -0.393 |
| IFNg_GMCSF1 | -0.666 | -0.729 |
| Rv1432_day32 | 0.027 | -2.511 |
| Rv1565c_day32 | -1.079 | -3.45 |
| secA2_input | 0.322 | 0.125 |
| delta_Rv3594 | -0.031 | -0.35 |
| delta_Rv3717 | -0.127 | -1.519 |
| delta_Rv3811 | -0.379 | -0.388 |
| delta_Rv0954 | -0.052 | -0.698 |
| PonA1 | -0.983 | -1.468 |
| EccD1_KO | 0.227 | 0.648 |
| EspI_KO | 0.938 | 0.322 |
| PE35_KO | 0.438 | 0.362 |
| PPE68_KO | 0.326 | 0.758 |
| glycerol2 | -0.071 | 0.245 |
| lignocerate | 0.06 | -0.377 |
| oleate | 1.073 | 1.483 |
| phosphatidylcholine | 0.035 | 0.515 |
| acetate | -0.171 | -1.051 |
| glucAc | -0.378 | -1.415 |
| Rv0950ko | 0.256 | -0.027 |
| Rv1096ko | 1.806 | 1.719 |
| Rv3684ko | 0.91 | 1.107 |
| delta_otsA_trehalose | -0.37 | -0.012 |