Top 10 genes with highest correlation to Rv2499c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0089/- | (cc=0.7449) | info on Rv0089/- |
| Rv3354/- | (cc=0.7441) | info on Rv3354/- |
| Rv1974/- | (cc=0.7416) | info on Rv1974/- |
| Rv2633c/- | (cc=0.7387) | info on Rv2633c/- |
| Rv0228/- | (cc=0.7251) | info on Rv0228/- |
| Rv3059/cyp136 | (cc=0.7019) | info on Rv3059/cyp136 |
| Rv0887c/- | (cc=0.7005) | info on Rv0887c/- |
| Rv1999c/- | (cc=0.6894) | info on Rv1999c/- |
| Rv3395c/- | (cc=0.6815) | info on Rv3395c/- |
| Rv2474c/- | (cc=0.6756) | info on Rv2474c/- |
Correlation of Rv2499c/- with Rv3395c/-
Normalized LFCs for Rv2499c/-:
(description and provenance of datasets)
| Rv2499c/- | Rv3395c/- | |
| Fe_supp_jason_reseq | -0.616 | 0.38 |
| low_pH_jason_reseq | -1.8 | 0.142 |
| NO_jason_reseq | -0.924 | 1.496 |
| B6_jason_reseq | 1.142 | 2.279 |
| MHCII_jason_reseq | -1.609 | 2.468 |
| Isoniazid02 | -0.872 | 2.949 |
| Rifampicin4 | 0.533 | 1.776 |
| Ethambutol3 | -0.694 | 2.824 |
| Meropenem3 | 0.195 | 0.666 |
| Vancomycin16 | 0.247 | 0.83 |
| Rv2680_day32 | 0.0 | -0.131 |
| H37Rv_KO_MarP | 0.174 | 0.207 |
| hypoxia_3wks | -0.742 | -1.463 |
| hypoxia_6wks | -0.388 | -1.685 |
| glycerol | 0.967 | 1.328 |
| cholesterol | -0.119 | -0.104 |
| AJ | -0.343 | 0.723 |
| Bibs02 | 0.26 | -1.807 |
| Bibs02c | -1.214 | -0.13 |
| BL6 | -2.242 | -1.264 |
| BL6a | -2.115 | -0.217 |
| BXD01 | -2.665 | -1.377 |
| BXD010 | -2.664 | -1.699 |
| BXD011 | -2.425 | -1.44 |
| BXD03 | -2.86 | -2.616 |
| BXD04 | -1.887 | -1.368 |
| BXD05 | -3.683 | -1.745 |
| BXD06 | -2.522 | -2.2 |
| BXD07 | -3.265 | -3.021 |
| BXD08 | -2.572 | 1.085 |
| BXD09 | -3.757 | -2.15 |
| CAST | -0.622 | 0.02 |
| CCcont | -1.876 | -0.876 |
| DS01 | -1.617 | -0.303 |
| DS02 | -0.791 | 0.214 |
| DS04 | -1.667 | 0.0 |
| DS0c | -1.086 | 0.231 |
| GP01 | -2.003 | -1.669 |
| GP02 | -3.206 | -1.61 |
| GP0c | -2.75 | -0.931 |
| NOD | -0.552 | -0.971 |
| NZO | -0.509 | -0.218 |
| PWK | -0.401 | 0.871 |
| H37Rv_KO_CtpC | -3.906 | -3.435 |
| H37Rv_KO_CtpD | -3.139 | -2.598 |
| H37Rv_KO_Rv1272 | -1.794 | 1.022 |
| H37Rv_KO_SugABC | -2.382 | -1.973 |
| H37Rv_KO_MbtN | -3.225 | -1.836 |
| Trans05 | -4.218 | -0.045 |
| macrophage_unactivated | -2.538 | -3.857 |
| IL1 | -2.322 | -4.405 |
| Rapamycin | -4.431 | -3.069 |
| Tcell | -1.672 | -2.255 |
| GMCSF | -3.725 | -2.64 |
| IFNab | -3.292 | -0.553 |
| IFNg | -4.137 | -1.849 |
| IFNg_GMCSF1 | -1.141 | -1.524 |
| Rv1432_day32 | -1.549 | -0.142 |
| Rv1565c_day32 | -0.981 | -2.088 |
| secA2_input | -0.853 | 1.108 |
| delta_Rv3594 | 0.676 | 2.877 |
| delta_Rv3717 | 0.453 | 3.361 |
| delta_Rv3811 | 1.121 | 1.988 |
| delta_Rv0954 | -0.509 | 2.113 |
| PonA1 | 0.634 | 2.765 |
| EccD1_KO | 0.835 | -0.296 |
| EspI_KO | 1.021 | -1.335 |
| PE35_KO | 0.96 | -1.508 |
| PPE68_KO | 0.96 | -1.129 |
| glycerol2 | 1.667 | 3.254 |
| lignocerate | 2.366 | 3.841 |
| oleate | -2.006 | 0.0 |
| phosphatidylcholine | 1.902 | 3.408 |
| acetate | 2.258 | 5.243 |
| glucAc | 1.881 | 3.947 |
| Rv0950ko | 0.133 | -0.344 |
| Rv1096ko | -1.948 | 0.268 |
| Rv3684ko | -0.458 | 0.4 |
| delta_otsA_trehalose | 1.593 | -0.408 |