Top 10 genes with highest correlation to Rv2499c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0089/- | (cc=0.7449) | info on Rv0089/- |
| Rv3354/- | (cc=0.7441) | info on Rv3354/- |
| Rv1974/- | (cc=0.7416) | info on Rv1974/- |
| Rv2633c/- | (cc=0.7387) | info on Rv2633c/- |
| Rv0228/- | (cc=0.7251) | info on Rv0228/- |
| Rv3059/cyp136 | (cc=0.7019) | info on Rv3059/cyp136 |
| Rv0887c/- | (cc=0.7005) | info on Rv0887c/- |
| Rv1999c/- | (cc=0.6894) | info on Rv1999c/- |
| Rv3395c/- | (cc=0.6815) | info on Rv3395c/- |
| Rv2474c/- | (cc=0.6756) | info on Rv2474c/- |
Correlation of Rv2499c/- with Rv0089/-
Normalized LFCs for Rv2499c/-:
(description and provenance of datasets)
| Rv2499c/- | Rv0089/- | |
| Fe_supp_jason_reseq | -0.616 | -0.617 |
| low_pH_jason_reseq | -1.8 | -0.221 |
| NO_jason_reseq | -0.924 | 0.047 |
| B6_jason_reseq | 1.142 | 0.241 |
| MHCII_jason_reseq | -1.609 | 0.487 |
| Isoniazid02 | -0.872 | 0.877 |
| Rifampicin4 | 0.533 | -0.701 |
| Ethambutol3 | -0.694 | -0.483 |
| Meropenem3 | 0.195 | -0.564 |
| Vancomycin16 | 0.247 | 0.0 |
| Rv2680_day32 | 0.0 | 1.554 |
| H37Rv_KO_MarP | 0.174 | 1.943 |
| hypoxia_3wks | -0.742 | -0.59 |
| hypoxia_6wks | -0.388 | -0.699 |
| glycerol | 0.967 | -1.188 |
| cholesterol | -0.119 | -0.61 |
| AJ | -0.343 | 0.069 |
| Bibs02 | 0.26 | 0.098 |
| Bibs02c | -1.214 | 0.0 |
| BL6 | -2.242 | -1.724 |
| BL6a | -2.115 | -1.411 |
| BXD01 | -2.665 | -1.681 |
| BXD010 | -2.664 | -1.478 |
| BXD011 | -2.425 | -1.727 |
| BXD03 | -2.86 | -1.397 |
| BXD04 | -1.887 | -0.973 |
| BXD05 | -3.683 | -1.529 |
| BXD06 | -2.522 | -1.642 |
| BXD07 | -3.265 | -2.006 |
| BXD08 | -2.572 | -2.382 |
| BXD09 | -3.757 | -1.596 |
| CAST | -0.622 | 0.492 |
| CCcont | -1.876 | -0.977 |
| DS01 | -1.617 | -0.209 |
| DS02 | -0.791 | 0.153 |
| DS04 | -1.667 | 0.462 |
| DS0c | -1.086 | 0.308 |
| GP01 | -2.003 | 0.326 |
| GP02 | -3.206 | -1.336 |
| GP0c | -2.75 | -0.489 |
| NOD | -0.552 | 0.145 |
| NZO | -0.509 | -0.1 |
| PWK | -0.401 | 0.389 |
| H37Rv_KO_CtpC | -3.906 | -1.138 |
| H37Rv_KO_CtpD | -3.139 | -3.064 |
| H37Rv_KO_Rv1272 | -1.794 | -0.742 |
| H37Rv_KO_SugABC | -2.382 | -0.481 |
| H37Rv_KO_MbtN | -3.225 | -1.571 |
| Trans05 | -4.218 | 0.008 |
| macrophage_unactivated | -2.538 | -2.727 |
| IL1 | -2.322 | -1.246 |
| Rapamycin | -4.431 | -2.071 |
| Tcell | -1.672 | -1.3 |
| GMCSF | -3.725 | -1.848 |
| IFNab | -3.292 | -2.524 |
| IFNg | -4.137 | -1.871 |
| IFNg_GMCSF1 | -1.141 | -0.936 |
| Rv1432_day32 | -1.549 | 0.301 |
| Rv1565c_day32 | -0.981 | 0.594 |
| secA2_input | -0.853 | -1.028 |
| delta_Rv3594 | 0.676 | 0.0 |
| delta_Rv3717 | 0.453 | -0.216 |
| delta_Rv3811 | 1.121 | 0.755 |
| delta_Rv0954 | -0.509 | 0.442 |
| PonA1 | 0.634 | -0.308 |
| EccD1_KO | 0.835 | -0.118 |
| EspI_KO | 1.021 | 1.221 |
| PE35_KO | 0.96 | 0.204 |
| PPE68_KO | 0.96 | 1.497 |
| glycerol2 | 1.667 | 1.494 |
| lignocerate | 2.366 | 1.736 |
| oleate | -2.006 | -0.505 |
| phosphatidylcholine | 1.902 | 1.304 |
| acetate | 2.258 | 2.168 |
| glucAc | 1.881 | 1.508 |
| Rv0950ko | 0.133 | -0.169 |
| Rv1096ko | -1.948 | 0.983 |
| Rv3684ko | -0.458 | 1.019 |
| delta_otsA_trehalose | 1.593 | 1.304 |