Top 10 genes with highest correlation to Rv2499c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0089/- | (cc=0.7449) | info on Rv0089/- |
| Rv3354/- | (cc=0.7441) | info on Rv3354/- |
| Rv1974/- | (cc=0.7416) | info on Rv1974/- |
| Rv2633c/- | (cc=0.7387) | info on Rv2633c/- |
| Rv0228/- | (cc=0.7251) | info on Rv0228/- |
| Rv3059/cyp136 | (cc=0.7019) | info on Rv3059/cyp136 |
| Rv0887c/- | (cc=0.7005) | info on Rv0887c/- |
| Rv1999c/- | (cc=0.6894) | info on Rv1999c/- |
| Rv3395c/- | (cc=0.6815) | info on Rv3395c/- |
| Rv2474c/- | (cc=0.6756) | info on Rv2474c/- |
Correlation of Rv2499c/- with Rv0228/-
Normalized LFCs for Rv2499c/-:
(description and provenance of datasets)
| Rv2499c/- | Rv0228/- | |
| Fe_supp_jason_reseq | -0.616 | 1.07 |
| low_pH_jason_reseq | -1.8 | 0.0 |
| NO_jason_reseq | -0.924 | 0.0 |
| B6_jason_reseq | 1.142 | 1.759 |
| MHCII_jason_reseq | -1.609 | 0.37 |
| Isoniazid02 | -0.872 | -0.167 |
| Rifampicin4 | 0.533 | 0.558 |
| Ethambutol3 | -0.694 | -0.14 |
| Meropenem3 | 0.195 | 0.128 |
| Vancomycin16 | 0.247 | 0.796 |
| Rv2680_day32 | 0.0 | 0.0 |
| H37Rv_KO_MarP | 0.174 | -0.684 |
| hypoxia_3wks | -0.742 | 0.678 |
| hypoxia_6wks | -0.388 | -0.626 |
| glycerol | 0.967 | 0.585 |
| cholesterol | -0.119 | 0.915 |
| AJ | -0.343 | 0.05 |
| Bibs02 | 0.26 | 0.56 |
| Bibs02c | -1.214 | -1.66 |
| BL6 | -2.242 | -2.023 |
| BL6a | -2.115 | -2.66 |
| BXD01 | -2.665 | -2.107 |
| BXD010 | -2.664 | -2.072 |
| BXD011 | -2.425 | -2.06 |
| BXD03 | -2.86 | -2.187 |
| BXD04 | -1.887 | -2.0 |
| BXD05 | -3.683 | -2.177 |
| BXD06 | -2.522 | -2.159 |
| BXD07 | -3.265 | -2.24 |
| BXD08 | -2.572 | -2.151 |
| BXD09 | -3.757 | -2.273 |
| CAST | -0.622 | -0.389 |
| CCcont | -1.876 | -2.131 |
| DS01 | -1.617 | -0.727 |
| DS02 | -0.791 | -1.942 |
| DS04 | -1.667 | 0.779 |
| DS0c | -1.086 | -1.431 |
| GP01 | -2.003 | -1.597 |
| GP02 | -3.206 | -1.346 |
| GP0c | -2.75 | -2.103 |
| NOD | -0.552 | -0.83 |
| NZO | -0.509 | -0.285 |
| PWK | -0.401 | 0.168 |
| H37Rv_KO_CtpC | -3.906 | -2.628 |
| H37Rv_KO_CtpD | -3.139 | -1.922 |
| H37Rv_KO_Rv1272 | -1.794 | -2.281 |
| H37Rv_KO_SugABC | -2.382 | -1.503 |
| H37Rv_KO_MbtN | -3.225 | -1.667 |
| Trans05 | -4.218 | -1.983 |
| macrophage_unactivated | -2.538 | -2.923 |
| IL1 | -2.322 | -2.747 |
| Rapamycin | -4.431 | -2.842 |
| Tcell | -1.672 | -3.017 |
| GMCSF | -3.725 | -2.445 |
| IFNab | -3.292 | -2.799 |
| IFNg | -4.137 | -2.475 |
| IFNg_GMCSF1 | -1.141 | -1.386 |
| Rv1432_day32 | -1.549 | 0.0 |
| Rv1565c_day32 | -0.981 | 0.0 |
| secA2_input | -0.853 | 1.565 |
| delta_Rv3594 | 0.676 | 0.402 |
| delta_Rv3717 | 0.453 | 0.0 |
| delta_Rv3811 | 1.121 | 0.205 |
| delta_Rv0954 | -0.509 | 0.0 |
| PonA1 | 0.634 | 0.0 |
| EccD1_KO | 0.835 | -0.865 |
| EspI_KO | 1.021 | -0.359 |
| PE35_KO | 0.96 | -0.368 |
| PPE68_KO | 0.96 | -0.841 |
| glycerol2 | 1.667 | 0.0 |
| lignocerate | 2.366 | 0.591 |
| oleate | -2.006 | 0.0 |
| phosphatidylcholine | 1.902 | 0.193 |
| acetate | 2.258 | 0.0 |
| glucAc | 1.881 | 0.0 |
| Rv0950ko | 0.133 | 0.793 |
| Rv1096ko | -1.948 | 1.143 |
| Rv3684ko | -0.458 | 0.452 |
| delta_otsA_trehalose | 1.593 | 0.0 |