Top 10 genes with highest correlation to Rv2491/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3110/moaB1 | (cc=0.5125) | info on Rv3110/moaB1 |
| Rv1073/- | (cc=0.4958) | info on Rv1073/- |
| Rv2396/PE_PGRS41 | (cc=0.4604) | info on Rv2396/PE_PGRS41 |
| Rv1498c/- | (cc=0.4582) | info on Rv1498c/- |
| Rv1923/lipD | (cc=0.4526) | info on Rv1923/lipD |
| Rv1647/- | (cc=0.4475) | info on Rv1647/- |
| Rv3217c/- | (cc=0.4425) | info on Rv3217c/- |
| Rv1470/trxA | (cc=0.4353) | info on Rv1470/trxA |
| Rv3643/- | (cc=0.4321) | info on Rv3643/- |
| Rv3109/moaA1 | (cc=0.431) | info on Rv3109/moaA1 |
Correlation of Rv2491/- with Rv2396/PE_PGRS41
Normalized LFCs for Rv2491/-:
(description and provenance of datasets)
| Rv2491/- | Rv2396/PE_PGRS41 | |
| Fe_supp_jason_reseq | 2.339 | 0.778 |
| low_pH_jason_reseq | -0.358 | -0.304 |
| NO_jason_reseq | 0.711 | -0.242 |
| B6_jason_reseq | -0.443 | 0.383 |
| MHCII_jason_reseq | -0.05 | 1.08 |
| Isoniazid02 | -1.436 | 0.019 |
| Rifampicin4 | 0.173 | 0.06 |
| Ethambutol3 | -1.584 | -0.022 |
| Meropenem3 | -1.064 | -0.331 |
| Vancomycin16 | -0.804 | -0.109 |
| Rv2680_day32 | 0.171 | -0.576 |
| H37Rv_KO_MarP | -0.635 | -0.045 |
| hypoxia_3wks | 0.478 | -0.801 |
| hypoxia_6wks | 0.994 | -0.432 |
| glycerol | -2.108 | 0.489 |
| cholesterol | -0.827 | -0.292 |
| AJ | 0.242 | 0.576 |
| Bibs02 | 0.6 | 0.442 |
| Bibs02c | -0.18 | 1.161 |
| BL6 | -0.266 | 0.0 |
| BL6a | 0.441 | 0.264 |
| BXD01 | -0.683 | -0.145 |
| BXD010 | 0.655 | -0.214 |
| BXD011 | -0.229 | -0.021 |
| BXD03 | 0.036 | 0.214 |
| BXD04 | -0.896 | 0.335 |
| BXD05 | -1.051 | 0.497 |
| BXD06 | 0.297 | 0.079 |
| BXD07 | -0.16 | -0.18 |
| BXD08 | -0.527 | 0.309 |
| BXD09 | -0.802 | 0.072 |
| CAST | -0.34 | -0.44 |
| CCcont | -0.592 | 0.122 |
| DS01 | -1.348 | -0.029 |
| DS02 | -0.537 | 0.498 |
| DS04 | -1.107 | 0.031 |
| DS0c | -1.138 | 0.497 |
| GP01 | 1.444 | 0.028 |
| GP02 | -0.235 | 1.743 |
| GP0c | 1.012 | 0.178 |
| NOD | 0.0 | 0.234 |
| NZO | 0.0 | -0.231 |
| PWK | 0.602 | -0.04 |
| H37Rv_KO_CtpC | 2.331 | 0.641 |
| H37Rv_KO_CtpD | 1.227 | 1.276 |
| H37Rv_KO_Rv1272 | 1.059 | 1.107 |
| H37Rv_KO_SugABC | 1.033 | 0.494 |
| H37Rv_KO_MbtN | 1.734 | 0.697 |
| Trans05 | 1.71 | 0.96 |
| macrophage_unactivated | -1.222 | -1.316 |
| IL1 | -1.492 | -0.409 |
| Rapamycin | -0.555 | -0.669 |
| Tcell | -0.912 | -0.655 |
| GMCSF | -0.478 | 0.135 |
| IFNab | -1.17 | -0.726 |
| IFNg | 0.0 | -0.839 |
| IFNg_GMCSF1 | 0.0 | 0.355 |
| Rv1432_day32 | -1.555 | 0.149 |
| Rv1565c_day32 | -0.147 | 0.118 |
| secA2_input | 0.312 | -0.031 |
| delta_Rv3594 | -0.335 | 0.45 |
| delta_Rv3717 | -0.565 | -0.176 |
| delta_Rv3811 | -0.587 | -0.113 |
| delta_Rv0954 | -0.345 | 0.129 |
| PonA1 | -0.652 | 0.214 |
| EccD1_KO | -0.247 | 0.595 |
| EspI_KO | 0.205 | 0.374 |
| PE35_KO | 0.779 | 0.44 |
| PPE68_KO | 0.0 | 0.688 |
| glycerol2 | 0.488 | 1.361 |
| lignocerate | 1.442 | 1.61 |
| oleate | 0.634 | 0.552 |
| phosphatidylcholine | 1.104 | 1.448 |
| acetate | 2.326 | 0.959 |
| glucAc | 1.683 | 1.051 |
| Rv0950ko | -1.269 | -0.015 |
| Rv1096ko | -2.126 | -0.66 |
| Rv3684ko | 0.062 | -0.108 |
| delta_otsA_trehalose | -0.241 | -1.153 |