Top 10 genes with highest correlation to Rv2491/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3110/moaB1 | (cc=0.5125) | info on Rv3110/moaB1 |
| Rv1073/- | (cc=0.4958) | info on Rv1073/- |
| Rv2396/PE_PGRS41 | (cc=0.4604) | info on Rv2396/PE_PGRS41 |
| Rv1498c/- | (cc=0.4582) | info on Rv1498c/- |
| Rv1923/lipD | (cc=0.4526) | info on Rv1923/lipD |
| Rv1647/- | (cc=0.4475) | info on Rv1647/- |
| Rv3217c/- | (cc=0.4425) | info on Rv3217c/- |
| Rv1470/trxA | (cc=0.4353) | info on Rv1470/trxA |
| Rv3643/- | (cc=0.4321) | info on Rv3643/- |
| Rv3109/moaA1 | (cc=0.431) | info on Rv3109/moaA1 |
Correlation of Rv2491/- with Rv1647/-
Normalized LFCs for Rv2491/-:
(description and provenance of datasets)
| Rv2491/- | Rv1647/- | |
| Fe_supp_jason_reseq | 2.339 | 0.949 |
| low_pH_jason_reseq | -0.358 | 0.144 |
| NO_jason_reseq | 0.711 | -0.436 |
| B6_jason_reseq | -0.443 | 0.996 |
| MHCII_jason_reseq | -0.05 | 1.006 |
| Isoniazid02 | -1.436 | -1.043 |
| Rifampicin4 | 0.173 | -1.213 |
| Ethambutol3 | -1.584 | -1.504 |
| Meropenem3 | -1.064 | -0.919 |
| Vancomycin16 | -0.804 | -0.793 |
| Rv2680_day32 | 0.171 | 0.5 |
| H37Rv_KO_MarP | -0.635 | 0.01 |
| hypoxia_3wks | 0.478 | 0.518 |
| hypoxia_6wks | 0.994 | 0.361 |
| glycerol | -2.108 | -0.679 |
| cholesterol | -0.827 | -0.695 |
| AJ | 0.242 | -0.267 |
| Bibs02 | 0.6 | 0.615 |
| Bibs02c | -0.18 | -0.268 |
| BL6 | -0.266 | -0.434 |
| BL6a | 0.441 | -0.159 |
| BXD01 | -0.683 | -0.889 |
| BXD010 | 0.655 | -0.245 |
| BXD011 | -0.229 | -0.717 |
| BXD03 | 0.036 | -1.129 |
| BXD04 | -0.896 | -0.712 |
| BXD05 | -1.051 | -0.785 |
| BXD06 | 0.297 | -0.456 |
| BXD07 | -0.16 | -0.159 |
| BXD08 | -0.527 | -0.305 |
| BXD09 | -0.802 | -1.045 |
| CAST | -0.34 | 0.27 |
| CCcont | -0.592 | -0.954 |
| DS01 | -1.348 | -0.508 |
| DS02 | -0.537 | 0.115 |
| DS04 | -1.107 | -0.299 |
| DS0c | -1.138 | 0.537 |
| GP01 | 1.444 | 0.865 |
| GP02 | -0.235 | 0.728 |
| GP0c | 1.012 | 0.338 |
| NOD | 0.0 | -1.036 |
| NZO | 0.0 | -0.071 |
| PWK | 0.602 | 0.161 |
| H37Rv_KO_CtpC | 2.331 | 0.564 |
| H37Rv_KO_CtpD | 1.227 | 1.06 |
| H37Rv_KO_Rv1272 | 1.059 | -0.351 |
| H37Rv_KO_SugABC | 1.033 | -0.344 |
| H37Rv_KO_MbtN | 1.734 | 0.915 |
| Trans05 | 1.71 | -1.311 |
| macrophage_unactivated | -1.222 | -1.247 |
| IL1 | -1.492 | -1.332 |
| Rapamycin | -0.555 | -0.951 |
| Tcell | -0.912 | -0.932 |
| GMCSF | -0.478 | -0.692 |
| IFNab | -1.17 | -0.865 |
| IFNg | 0.0 | -1.034 |
| IFNg_GMCSF1 | 0.0 | -0.698 |
| Rv1432_day32 | -1.555 | -0.533 |
| Rv1565c_day32 | -0.147 | 0.281 |
| secA2_input | 0.312 | 0.177 |
| delta_Rv3594 | -0.335 | 0.191 |
| delta_Rv3717 | -0.565 | -0.062 |
| delta_Rv3811 | -0.587 | -0.504 |
| delta_Rv0954 | -0.345 | 0.362 |
| PonA1 | -0.652 | -0.193 |
| EccD1_KO | -0.247 | 1.263 |
| EspI_KO | 0.205 | 1.172 |
| PE35_KO | 0.779 | 0.484 |
| PPE68_KO | 0.0 | 0.582 |
| glycerol2 | 0.488 | 0.291 |
| lignocerate | 1.442 | 0.403 |
| oleate | 0.634 | 0.542 |
| phosphatidylcholine | 1.104 | 0.574 |
| acetate | 2.326 | 0.236 |
| glucAc | 1.683 | -0.11 |
| Rv0950ko | -1.269 | 0.066 |
| Rv1096ko | -2.126 | 0.452 |
| Rv3684ko | 0.062 | -0.439 |
| delta_otsA_trehalose | -0.241 | 0.497 |