Top 10 genes with highest correlation to Rv2491/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3110/moaB1 | (cc=0.5125) | info on Rv3110/moaB1 |
| Rv1073/- | (cc=0.4958) | info on Rv1073/- |
| Rv2396/PE_PGRS41 | (cc=0.4604) | info on Rv2396/PE_PGRS41 |
| Rv1498c/- | (cc=0.4582) | info on Rv1498c/- |
| Rv1923/lipD | (cc=0.4526) | info on Rv1923/lipD |
| Rv1647/- | (cc=0.4475) | info on Rv1647/- |
| Rv3217c/- | (cc=0.4425) | info on Rv3217c/- |
| Rv1470/trxA | (cc=0.4353) | info on Rv1470/trxA |
| Rv3643/- | (cc=0.4321) | info on Rv3643/- |
| Rv3109/moaA1 | (cc=0.431) | info on Rv3109/moaA1 |
Correlation of Rv2491/- with Rv1073/-
Normalized LFCs for Rv2491/-:
(description and provenance of datasets)
| Rv2491/- | Rv1073/- | |
| Fe_supp_jason_reseq | 2.339 | 0.698 |
| low_pH_jason_reseq | -0.358 | -0.09 |
| NO_jason_reseq | 0.711 | 0.357 |
| B6_jason_reseq | -0.443 | 0.616 |
| MHCII_jason_reseq | -0.05 | 0.156 |
| Isoniazid02 | -1.436 | -0.514 |
| Rifampicin4 | 0.173 | -0.493 |
| Ethambutol3 | -1.584 | -0.375 |
| Meropenem3 | -1.064 | 0.551 |
| Vancomycin16 | -0.804 | -0.602 |
| Rv2680_day32 | 0.171 | -0.121 |
| H37Rv_KO_MarP | -0.635 | -0.238 |
| hypoxia_3wks | 0.478 | 0.423 |
| hypoxia_6wks | 0.994 | 0.522 |
| glycerol | -2.108 | -0.344 |
| cholesterol | -0.827 | -0.173 |
| AJ | 0.242 | -0.476 |
| Bibs02 | 0.6 | 0.754 |
| Bibs02c | -0.18 | 0.186 |
| BL6 | -0.266 | 0.376 |
| BL6a | 0.441 | 0.247 |
| BXD01 | -0.683 | 0.128 |
| BXD010 | 0.655 | 0.246 |
| BXD011 | -0.229 | 0.46 |
| BXD03 | 0.036 | -0.074 |
| BXD04 | -0.896 | -0.114 |
| BXD05 | -1.051 | 0.058 |
| BXD06 | 0.297 | 0.184 |
| BXD07 | -0.16 | 0.571 |
| BXD08 | -0.527 | 0.261 |
| BXD09 | -0.802 | 0.276 |
| CAST | -0.34 | 0.227 |
| CCcont | -0.592 | 0.113 |
| DS01 | -1.348 | -0.118 |
| DS02 | -0.537 | -0.395 |
| DS04 | -1.107 | 0.396 |
| DS0c | -1.138 | 0.074 |
| GP01 | 1.444 | 1.222 |
| GP02 | -0.235 | 0.326 |
| GP0c | 1.012 | 0.603 |
| NOD | 0.0 | 0.732 |
| NZO | 0.0 | 0.178 |
| PWK | 0.602 | -0.038 |
| H37Rv_KO_CtpC | 2.331 | 0.53 |
| H37Rv_KO_CtpD | 1.227 | 0.509 |
| H37Rv_KO_Rv1272 | 1.059 | 0.259 |
| H37Rv_KO_SugABC | 1.033 | 1.275 |
| H37Rv_KO_MbtN | 1.734 | 1.271 |
| Trans05 | 1.71 | 1.424 |
| macrophage_unactivated | -1.222 | -0.464 |
| IL1 | -1.492 | 0.219 |
| Rapamycin | -0.555 | -0.313 |
| Tcell | -0.912 | -0.059 |
| GMCSF | -0.478 | -0.708 |
| IFNab | -1.17 | -0.178 |
| IFNg | 0.0 | -0.224 |
| IFNg_GMCSF1 | 0.0 | -0.057 |
| Rv1432_day32 | -1.555 | 0.137 |
| Rv1565c_day32 | -0.147 | -1.377 |
| secA2_input | 0.312 | -0.479 |
| delta_Rv3594 | -0.335 | 0.109 |
| delta_Rv3717 | -0.565 | -0.132 |
| delta_Rv3811 | -0.587 | -0.156 |
| delta_Rv0954 | -0.345 | -0.525 |
| PonA1 | -0.652 | -0.63 |
| EccD1_KO | -0.247 | 0.556 |
| EspI_KO | 0.205 | 1.141 |
| PE35_KO | 0.779 | 1.698 |
| PPE68_KO | 0.0 | 1.619 |
| glycerol2 | 0.488 | 0.715 |
| lignocerate | 1.442 | 0.452 |
| oleate | 0.634 | 0.635 |
| phosphatidylcholine | 1.104 | 0.562 |
| acetate | 2.326 | 0.176 |
| glucAc | 1.683 | -0.041 |
| Rv0950ko | -1.269 | 0.283 |
| Rv1096ko | -2.126 | -0.588 |
| Rv3684ko | 0.062 | 0.308 |
| delta_otsA_trehalose | -0.241 | 1.023 |