Top 10 genes with highest correlation to Rv2486/echA14:
update plot | correlation | link to info on gene |
---|---|---|
Rv2313c/- | (cc=0.4892) | info on Rv2313c/- |
Rv2010/vapC15 | (cc=0.4217) | info on Rv2010/vapC15 |
Rv0230c/php | (cc=0.4197) | info on Rv0230c/php |
Rv1410c/- | (cc=0.4053) | info on Rv1410c/- |
Rv2658c/- | (cc=0.4016) | info on Rv2658c/- |
Rv3843c/- | (cc=0.395) | info on Rv3843c/- |
Rv1730c/- | (cc=0.3948) | info on Rv1730c/- |
Rv0015c/pknA | (cc=0.3946) | info on Rv0015c/pknA |
Rv0194/- | (cc=0.3919) | info on Rv0194/- |
Rv0160c/PE4 | (cc=0.3912) | info on Rv0160c/PE4 |
Correlation of Rv2486/echA14 with Rv1730c/-
Normalized LFCs for Rv2486/echA14:
(description and provenance of datasets)
Rv2486/echA14 | Rv1730c/- | |
Fe_supp_jason_reseq | 0.979 | 0.45 |
low_pH_jason_reseq | -0.525 | 1.029 |
NO_jason_reseq | -0.105 | -0.373 |
B6_jason_reseq | 1.292 | 1.364 |
MHCII_jason_reseq | 0.524 | 0.91 |
Isoniazid02 | -0.732 | -0.3 |
Rifampicin4 | -0.818 | -0.412 |
Ethambutol3 | -0.789 | -0.06 |
Meropenem3 | -0.648 | -0.12 |
Vancomycin16 | -0.905 | 0.0 |
Rv2680_day32 | 0.651 | 1.114 |
H37Rv_KO_MarP | 0.26 | -0.371 |
hypoxia_3wks | 0.427 | 0.618 |
hypoxia_6wks | 0.409 | 0.111 |
glycerol | 0.922 | 0.101 |
cholesterol | 0.184 | 0.429 |
AJ | 0.424 | 0.657 |
Bibs02 | 0.465 | 0.612 |
Bibs02c | 0.482 | -0.036 |
BL6 | -0.744 | -0.619 |
BL6a | 0.343 | -0.63 |
BXD01 | 0.02 | -0.141 |
BXD010 | -0.035 | -0.906 |
BXD011 | -0.443 | -1.085 |
BXD03 | -0.339 | -0.785 |
BXD04 | -0.228 | -1.318 |
BXD05 | -0.461 | -0.781 |
BXD06 | 0.218 | -0.394 |
BXD07 | -0.32 | -0.44 |
BXD08 | 0.122 | 0.0 |
BXD09 | -0.044 | -0.858 |
CAST | 0.035 | 0.936 |
CCcont | -0.829 | -0.62 |
DS01 | -0.32 | -0.696 |
DS02 | -0.432 | 0.109 |
DS04 | -0.171 | 0.308 |
DS0c | -0.332 | -0.64 |
GP01 | 0.309 | -1.595 |
GP02 | 0.42 | -1.111 |
GP0c | 0.11 | -0.608 |
NOD | 0.207 | -0.42 |
NZO | 0.286 | 0.431 |
PWK | -0.061 | 0.607 |
H37Rv_KO_CtpC | -0.808 | -0.992 |
H37Rv_KO_CtpD | 0.374 | -0.022 |
H37Rv_KO_Rv1272 | -0.417 | -0.818 |
H37Rv_KO_SugABC | 0.034 | 0.319 |
H37Rv_KO_MbtN | 0.175 | -1.585 |
Trans05 | 0.804 | 0.437 |
macrophage_unactivated | 0.164 | -0.379 |
IL1 | 0.952 | 0.483 |
Rapamycin | 0.669 | -0.565 |
Tcell | 0.205 | -0.192 |
GMCSF | 0.211 | -0.85 |
IFNab | 0.659 | -0.46 |
IFNg | 0.094 | -0.238 |
IFNg_GMCSF1 | 0.748 | -0.091 |
Rv1432_day32 | 0.0 | -1.724 |
Rv1565c_day32 | -0.039 | -0.381 |
secA2_input | 0.343 | -0.523 |
delta_Rv3594 | -0.093 | -0.145 |
delta_Rv3717 | -1.004 | -0.877 |
delta_Rv3811 | -0.711 | -0.758 |
delta_Rv0954 | -0.065 | 0.605 |
PonA1 | -0.899 | -0.862 |
EccD1_KO | -0.174 | -0.141 |
EspI_KO | 0.066 | 0.12 |
PE35_KO | -0.423 | 0.0 |
PPE68_KO | -0.422 | -0.138 |
glycerol2 | 0.329 | 0.444 |
lignocerate | 0.434 | 0.061 |
oleate | 0.438 | 0.889 |
phosphatidylcholine | 0.385 | 0.808 |
acetate | -0.455 | 0.042 |
glucAc | -0.189 | -0.456 |
Rv0950ko | -0.238 | -1.095 |
Rv1096ko | -0.67 | -2.063 |
Rv3684ko | -0.465 | -1.611 |
delta_otsA_trehalose | 0.42 | -1.89 |