Top 10 genes with highest correlation to Rv2467/pepN:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1287/- | (cc=0.7005) | info on Rv1287/- |
| Rv2733c/- | (cc=0.6935) | info on Rv2733c/- |
| Rv2140c/TB18.6 | (cc=0.6873) | info on Rv2140c/TB18.6 |
| Rv1473/- | (cc=0.6869) | info on Rv1473/- |
| Rv0806c/cpsY | (cc=0.6826) | info on Rv0806c/cpsY |
| Rv2091c/- | (cc=0.6447) | info on Rv2091c/- |
| Rv1824/- | (cc=0.6432) | info on Rv1824/- |
| Rv1158c/- | (cc=0.5902) | info on Rv1158c/- |
| Rv2672/- | (cc=0.5881) | info on Rv2672/- |
| Rv0561c/- | (cc=0.5835) | info on Rv0561c/- |
Correlation of Rv2467/pepN with Rv2672/-
Normalized LFCs for Rv2467/pepN:
(description and provenance of datasets)
| Rv2467/pepN | Rv2672/- | |
| Fe_supp_jason_reseq | 3.498 | 2.265 |
| low_pH_jason_reseq | 0.831 | 0.447 |
| NO_jason_reseq | -1.016 | -2.103 |
| B6_jason_reseq | -0.311 | 0.114 |
| MHCII_jason_reseq | 1.018 | 0.051 |
| Isoniazid02 | -0.077 | 1.539 |
| Rifampicin4 | -0.915 | -0.842 |
| Ethambutol3 | 0.18 | 0.203 |
| Meropenem3 | 0.049 | -0.072 |
| Vancomycin16 | -0.17 | 0.117 |
| Rv2680_day32 | -0.75 | -1.259 |
| H37Rv_KO_MarP | 0.388 | 1.587 |
| hypoxia_3wks | -1.017 | -0.845 |
| hypoxia_6wks | -1.432 | -3.046 |
| glycerol | 1.006 | 0.674 |
| cholesterol | 1.421 | -0.507 |
| AJ | -0.482 | -1.407 |
| Bibs02 | -0.55 | -0.498 |
| Bibs02c | 0.674 | -0.3 |
| BL6 | -1.549 | -0.738 |
| BL6a | 0.218 | -1.07 |
| BXD01 | -1.286 | -1.586 |
| BXD010 | -1.363 | -1.277 |
| BXD011 | -0.886 | -1.177 |
| BXD03 | -0.487 | -1.871 |
| BXD04 | -0.896 | -2.258 |
| BXD05 | -1.38 | -1.41 |
| BXD06 | -1.368 | -2.297 |
| BXD07 | -0.888 | -1.82 |
| BXD08 | -0.622 | -0.854 |
| BXD09 | -1.614 | -1.547 |
| CAST | -1.602 | -1.782 |
| CCcont | 0.399 | 0.955 |
| DS01 | -1.389 | -1.093 |
| DS02 | -1.843 | -0.195 |
| DS04 | -1.844 | -1.84 |
| DS0c | -0.781 | -0.36 |
| GP01 | -0.278 | -0.319 |
| GP02 | -0.063 | -1.151 |
| GP0c | -1.437 | -0.131 |
| NOD | -1.266 | -1.648 |
| NZO | -1.075 | -0.568 |
| PWK | -1.662 | -1.597 |
| H37Rv_KO_CtpC | 0.36 | -0.269 |
| H37Rv_KO_CtpD | -0.309 | 0.36 |
| H37Rv_KO_Rv1272 | 0.0 | -1.062 |
| H37Rv_KO_SugABC | -0.206 | 1.062 |
| H37Rv_KO_MbtN | -0.015 | -0.977 |
| Trans05 | -1.558 | -1.476 |
| macrophage_unactivated | 0.511 | 0.319 |
| IL1 | 0.481 | 0.05 |
| Rapamycin | 0.307 | -0.052 |
| Tcell | 0.821 | -1.15 |
| GMCSF | -0.38 | 1.341 |
| IFNab | -0.671 | 1.421 |
| IFNg | 0.179 | 1.05 |
| IFNg_GMCSF1 | 0.0 | 0.613 |
| Rv1432_day32 | 0.687 | -2.564 |
| Rv1565c_day32 | 0.261 | -0.313 |
| secA2_input | 0.573 | 0.933 |
| delta_Rv3594 | 2.216 | 0.595 |
| delta_Rv3717 | 0.784 | 0.179 |
| delta_Rv3811 | 1.785 | 0.308 |
| delta_Rv0954 | 0.364 | 0.762 |
| PonA1 | 0.044 | -0.885 |
| EccD1_KO | 0.99 | 0.638 |
| EspI_KO | 1.095 | -0.348 |
| PE35_KO | 1.286 | 0.149 |
| PPE68_KO | 1.725 | -0.211 |
| glycerol2 | -0.178 | -1.333 |
| lignocerate | -0.564 | -1.045 |
| oleate | -1.598 | -3.595 |
| phosphatidylcholine | -0.241 | -1.244 |
| acetate | 0.46 | 0.261 |
| glucAc | 0.295 | 0.034 |
| Rv0950ko | 0.103 | 0.715 |
| Rv1096ko | 0.202 | 0.115 |
| Rv3684ko | 1.159 | -0.128 |
| delta_otsA_trehalose | 0.437 | -1.288 |