Top 10 genes with highest correlation to Rv2467/pepN:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1287/- | (cc=0.7005) | info on Rv1287/- |
| Rv2733c/- | (cc=0.6935) | info on Rv2733c/- |
| Rv2140c/TB18.6 | (cc=0.6873) | info on Rv2140c/TB18.6 |
| Rv1473/- | (cc=0.6869) | info on Rv1473/- |
| Rv0806c/cpsY | (cc=0.6826) | info on Rv0806c/cpsY |
| Rv2091c/- | (cc=0.6447) | info on Rv2091c/- |
| Rv1824/- | (cc=0.6432) | info on Rv1824/- |
| Rv1158c/- | (cc=0.5902) | info on Rv1158c/- |
| Rv2672/- | (cc=0.5881) | info on Rv2672/- |
| Rv0561c/- | (cc=0.5835) | info on Rv0561c/- |
Correlation of Rv2467/pepN with Rv0561c/-
Normalized LFCs for Rv2467/pepN:
(description and provenance of datasets)
| Rv2467/pepN | Rv0561c/- | |
| Fe_supp_jason_reseq | 3.498 | 2.559 |
| low_pH_jason_reseq | 0.831 | 0.0 |
| NO_jason_reseq | -1.016 | -0.995 |
| B6_jason_reseq | -0.311 | -0.421 |
| MHCII_jason_reseq | 1.018 | 0.742 |
| Isoniazid02 | -0.077 | -0.045 |
| Rifampicin4 | -0.915 | -1.887 |
| Ethambutol3 | 0.18 | -0.517 |
| Meropenem3 | 0.049 | -0.895 |
| Vancomycin16 | -0.17 | -1.021 |
| Rv2680_day32 | -0.75 | -0.554 |
| H37Rv_KO_MarP | 0.388 | -0.838 |
| hypoxia_3wks | -1.017 | -1.543 |
| hypoxia_6wks | -1.432 | -1.599 |
| glycerol | 1.006 | 2.098 |
| cholesterol | 1.421 | 1.736 |
| AJ | -0.482 | -1.531 |
| Bibs02 | -0.55 | -0.563 |
| Bibs02c | 0.674 | -0.353 |
| BL6 | -1.549 | -2.023 |
| BL6a | 0.218 | -1.148 |
| BXD01 | -1.286 | -2.107 |
| BXD010 | -1.363 | -2.072 |
| BXD011 | -0.886 | -1.711 |
| BXD03 | -0.487 | -2.187 |
| BXD04 | -0.896 | -1.877 |
| BXD05 | -1.38 | -2.042 |
| BXD06 | -1.368 | -2.159 |
| BXD07 | -0.888 | -2.101 |
| BXD08 | -0.622 | -2.151 |
| BXD09 | -1.614 | -2.273 |
| CAST | -1.602 | -2.181 |
| CCcont | 0.399 | -0.552 |
| DS01 | -1.389 | 1.685 |
| DS02 | -1.843 | -0.544 |
| DS04 | -1.844 | -0.911 |
| DS0c | -0.781 | 1.37 |
| GP01 | -0.278 | -1.409 |
| GP02 | -0.063 | -1.263 |
| GP0c | -1.437 | -2.103 |
| NOD | -1.266 | -0.903 |
| NZO | -1.075 | -2.381 |
| PWK | -1.662 | -1.137 |
| H37Rv_KO_CtpC | 0.36 | -0.941 |
| H37Rv_KO_CtpD | -0.309 | -1.603 |
| H37Rv_KO_Rv1272 | 0.0 | -0.872 |
| H37Rv_KO_SugABC | -0.206 | -1.414 |
| H37Rv_KO_MbtN | -0.015 | -1.471 |
| Trans05 | -1.558 | -1.983 |
| macrophage_unactivated | 0.511 | -0.316 |
| IL1 | 0.481 | -1.735 |
| Rapamycin | 0.307 | -1.795 |
| Tcell | 0.821 | -0.671 |
| GMCSF | -0.38 | -1.18 |
| IFNab | -0.671 | -0.623 |
| IFNg | 0.179 | -1.195 |
| IFNg_GMCSF1 | 0.0 | -0.314 |
| Rv1432_day32 | 0.687 | -0.632 |
| Rv1565c_day32 | 0.261 | 0.0 |
| secA2_input | 0.573 | 0.676 |
| delta_Rv3594 | 2.216 | -0.684 |
| delta_Rv3717 | 0.784 | -0.736 |
| delta_Rv3811 | 1.785 | -0.665 |
| delta_Rv0954 | 0.364 | 2.95 |
| PonA1 | 0.044 | 2.163 |
| EccD1_KO | 0.99 | -0.26 |
| EspI_KO | 1.095 | 0.739 |
| PE35_KO | 1.286 | 0.496 |
| PPE68_KO | 1.725 | 0.394 |
| glycerol2 | -0.178 | -1.366 |
| lignocerate | -0.564 | -0.759 |
| oleate | -1.598 | -3.187 |
| phosphatidylcholine | -0.241 | -0.036 |
| acetate | 0.46 | 1.25 |
| glucAc | 0.295 | 0.853 |
| Rv0950ko | 0.103 | -0.989 |
| Rv1096ko | 0.202 | -0.549 |
| Rv3684ko | 1.159 | -0.596 |
| delta_otsA_trehalose | 0.437 | -0.234 |