Top 10 genes with highest correlation to Rv2467/pepN:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1287/- | (cc=0.7005) | info on Rv1287/- |
| Rv2733c/- | (cc=0.6935) | info on Rv2733c/- |
| Rv2140c/TB18.6 | (cc=0.6873) | info on Rv2140c/TB18.6 |
| Rv1473/- | (cc=0.6869) | info on Rv1473/- |
| Rv0806c/cpsY | (cc=0.6826) | info on Rv0806c/cpsY |
| Rv2091c/- | (cc=0.6447) | info on Rv2091c/- |
| Rv1824/- | (cc=0.6432) | info on Rv1824/- |
| Rv1158c/- | (cc=0.5902) | info on Rv1158c/- |
| Rv2672/- | (cc=0.5881) | info on Rv2672/- |
| Rv0561c/- | (cc=0.5835) | info on Rv0561c/- |
Correlation of Rv2467/pepN with Rv2140c/TB18.6
Normalized LFCs for Rv2467/pepN:
(description and provenance of datasets)
| Rv2467/pepN | Rv2140c/TB18.6 | |
| Fe_supp_jason_reseq | 3.498 | 3.198 |
| low_pH_jason_reseq | 0.831 | -0.582 |
| NO_jason_reseq | -1.016 | -1.273 |
| B6_jason_reseq | -0.311 | -0.538 |
| MHCII_jason_reseq | 1.018 | -0.34 |
| Isoniazid02 | -0.077 | -1.739 |
| Rifampicin4 | -0.915 | 2.101 |
| Ethambutol3 | 0.18 | 2.658 |
| Meropenem3 | 0.049 | 1.695 |
| Vancomycin16 | -0.17 | 2.159 |
| Rv2680_day32 | -0.75 | -0.459 |
| H37Rv_KO_MarP | 0.388 | 1.3 |
| hypoxia_3wks | -1.017 | -2.887 |
| hypoxia_6wks | -1.432 | -3.23 |
| glycerol | 1.006 | 1.988 |
| cholesterol | 1.421 | 1.327 |
| AJ | -0.482 | -2.513 |
| Bibs02 | -0.55 | -2.162 |
| Bibs02c | 0.674 | -0.653 |
| BL6 | -1.549 | -2.385 |
| BL6a | 0.218 | -1.502 |
| BXD01 | -1.286 | -2.483 |
| BXD010 | -1.363 | -2.442 |
| BXD011 | -0.886 | -1.803 |
| BXD03 | -0.487 | -2.578 |
| BXD04 | -0.896 | -2.358 |
| BXD05 | -1.38 | -2.31 |
| BXD06 | -1.368 | -2.545 |
| BXD07 | -0.888 | -2.376 |
| BXD08 | -0.622 | -2.536 |
| BXD09 | -1.614 | -2.679 |
| CAST | -1.602 | -3.415 |
| CCcont | 0.399 | 0.991 |
| DS01 | -1.389 | -3.343 |
| DS02 | -1.843 | -4.147 |
| DS04 | -1.844 | -2.624 |
| DS0c | -0.781 | -2.803 |
| GP01 | -0.278 | -1.536 |
| GP02 | -0.063 | -1.586 |
| GP0c | -1.437 | -2.231 |
| NOD | -1.266 | -1.149 |
| NZO | -1.075 | -2.698 |
| PWK | -1.662 | -2.909 |
| H37Rv_KO_CtpC | 0.36 | -2.788 |
| H37Rv_KO_CtpD | -0.309 | -1.878 |
| H37Rv_KO_Rv1272 | 0.0 | -2.689 |
| H37Rv_KO_SugABC | -0.206 | -1.28 |
| H37Rv_KO_MbtN | -0.015 | -1.022 |
| Trans05 | -1.558 | -2.362 |
| macrophage_unactivated | 0.511 | 0.379 |
| IL1 | 0.481 | -0.599 |
| Rapamycin | 0.307 | 0.187 |
| Tcell | 0.821 | -1.421 |
| GMCSF | -0.38 | -1.89 |
| IFNab | -0.671 | 0.363 |
| IFNg | 0.179 | -2.2 |
| IFNg_GMCSF1 | 0.0 | -1.939 |
| Rv1432_day32 | 0.687 | -2.746 |
| Rv1565c_day32 | 0.261 | -2.685 |
| secA2_input | 0.573 | 0.798 |
| delta_Rv3594 | 2.216 | 1.646 |
| delta_Rv3717 | 0.784 | -0.122 |
| delta_Rv3811 | 1.785 | 1.688 |
| delta_Rv0954 | 0.364 | 0.526 |
| PonA1 | 0.044 | -2.238 |
| EccD1_KO | 0.99 | 1.75 |
| EspI_KO | 1.095 | 1.423 |
| PE35_KO | 1.286 | 0.901 |
| PPE68_KO | 1.725 | 2.003 |
| glycerol2 | -0.178 | 1.808 |
| lignocerate | -0.564 | -0.812 |
| oleate | -1.598 | -0.614 |
| phosphatidylcholine | -0.241 | -0.324 |
| acetate | 0.46 | 0.482 |
| glucAc | 0.295 | 0.549 |
| Rv0950ko | 0.103 | 0.47 |
| Rv1096ko | 0.202 | -0.084 |
| Rv3684ko | 1.159 | -0.888 |
| delta_otsA_trehalose | 0.437 | 0.045 |