Top 10 genes with highest correlation to Rv2467/pepN:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1287/- | (cc=0.7005) | info on Rv1287/- |
| Rv2733c/- | (cc=0.6935) | info on Rv2733c/- |
| Rv2140c/TB18.6 | (cc=0.6873) | info on Rv2140c/TB18.6 |
| Rv1473/- | (cc=0.6869) | info on Rv1473/- |
| Rv0806c/cpsY | (cc=0.6826) | info on Rv0806c/cpsY |
| Rv2091c/- | (cc=0.6447) | info on Rv2091c/- |
| Rv1824/- | (cc=0.6432) | info on Rv1824/- |
| Rv1158c/- | (cc=0.5902) | info on Rv1158c/- |
| Rv2672/- | (cc=0.5881) | info on Rv2672/- |
| Rv0561c/- | (cc=0.5835) | info on Rv0561c/- |
Correlation of Rv2467/pepN with Rv1287/-
Normalized LFCs for Rv2467/pepN:
(description and provenance of datasets)
| Rv2467/pepN | Rv1287/- | |
| Fe_supp_jason_reseq | 3.498 | 2.9 |
| low_pH_jason_reseq | 0.831 | 0.323 |
| NO_jason_reseq | -1.016 | -0.583 |
| B6_jason_reseq | -0.311 | 0.571 |
| MHCII_jason_reseq | 1.018 | 0.098 |
| Isoniazid02 | -0.077 | 0.805 |
| Rifampicin4 | -0.915 | -0.374 |
| Ethambutol3 | 0.18 | 0.822 |
| Meropenem3 | 0.049 | 0.633 |
| Vancomycin16 | -0.17 | -0.31 |
| Rv2680_day32 | -0.75 | -2.282 |
| H37Rv_KO_MarP | 0.388 | 0.24 |
| hypoxia_3wks | -1.017 | -2.999 |
| hypoxia_6wks | -1.432 | -2.714 |
| glycerol | 1.006 | -0.66 |
| cholesterol | 1.421 | 2.591 |
| AJ | -0.482 | -1.44 |
| Bibs02 | -0.55 | -0.309 |
| Bibs02c | 0.674 | -0.64 |
| BL6 | -1.549 | -2.144 |
| BL6a | 0.218 | -2.04 |
| BXD01 | -1.286 | -2.037 |
| BXD010 | -1.363 | -1.759 |
| BXD011 | -0.886 | -2.084 |
| BXD03 | -0.487 | -1.284 |
| BXD04 | -0.896 | -1.934 |
| BXD05 | -1.38 | -1.929 |
| BXD06 | -1.368 | -1.914 |
| BXD07 | -0.888 | -1.315 |
| BXD08 | -0.622 | -1.827 |
| BXD09 | -1.614 | -2.409 |
| CAST | -1.602 | -1.779 |
| CCcont | 0.399 | -0.729 |
| DS01 | -1.389 | -0.772 |
| DS02 | -1.843 | -0.758 |
| DS04 | -1.844 | -0.593 |
| DS0c | -0.781 | -0.069 |
| GP01 | -0.278 | -1.865 |
| GP02 | -0.063 | -1.654 |
| GP0c | -1.437 | -2.455 |
| NOD | -1.266 | -1.886 |
| NZO | -1.075 | -2.419 |
| PWK | -1.662 | -1.391 |
| H37Rv_KO_CtpC | 0.36 | 0.872 |
| H37Rv_KO_CtpD | -0.309 | -0.683 |
| H37Rv_KO_Rv1272 | 0.0 | -1.513 |
| H37Rv_KO_SugABC | -0.206 | -1.251 |
| H37Rv_KO_MbtN | -0.015 | -1.062 |
| Trans05 | -1.558 | -1.721 |
| macrophage_unactivated | 0.511 | -0.12 |
| IL1 | 0.481 | -1.967 |
| Rapamycin | 0.307 | -0.761 |
| Tcell | 0.821 | 0.358 |
| GMCSF | -0.38 | -0.776 |
| IFNab | -0.671 | 0.435 |
| IFNg | 0.179 | -1.179 |
| IFNg_GMCSF1 | 0.0 | -1.225 |
| Rv1432_day32 | 0.687 | -0.787 |
| Rv1565c_day32 | 0.261 | 3.074 |
| secA2_input | 0.573 | 0.023 |
| delta_Rv3594 | 2.216 | 2.232 |
| delta_Rv3717 | 0.784 | 0.81 |
| delta_Rv3811 | 1.785 | 0.779 |
| delta_Rv0954 | 0.364 | 4.017 |
| PonA1 | 0.044 | 1.101 |
| EccD1_KO | 0.99 | 1.151 |
| EspI_KO | 1.095 | 2.321 |
| PE35_KO | 1.286 | 1.473 |
| PPE68_KO | 1.725 | 2.342 |
| glycerol2 | -0.178 | -0.43 |
| lignocerate | -0.564 | 0.675 |
| oleate | -1.598 | -0.603 |
| phosphatidylcholine | -0.241 | -0.043 |
| acetate | 0.46 | 0.025 |
| glucAc | 0.295 | 0.122 |
| Rv0950ko | 0.103 | -0.045 |
| Rv1096ko | 0.202 | 0.353 |
| Rv3684ko | 1.159 | 1.484 |
| delta_otsA_trehalose | 0.437 | 1.312 |