Top 10 genes with highest correlation to Rv2427c/proA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3904c/esxE | (cc=0.5706) | info on Rv3904c/esxE |
| Rv3024c/trmU | (cc=0.55) | info on Rv3024c/trmU |
| Rv3214/gpm2 | (cc=0.5361) | info on Rv3214/gpm2 |
| Rv1593c/- | (cc=0.5155) | info on Rv1593c/- |
| Rv1239c/corA | (cc=0.512) | info on Rv1239c/corA |
| Rv3584/lpqE | (cc=0.5086) | info on Rv3584/lpqE |
| Rv0047c/- | (cc=0.4965) | info on Rv0047c/- |
| Rv0956/purN | (cc=0.4908) | info on Rv0956/purN |
| Rv3421c/- | (cc=0.4862) | info on Rv3421c/- |
| Rv2683/- | (cc=0.484) | info on Rv2683/- |
Correlation of Rv2427c/proA with Rv3214/gpm2
Normalized LFCs for Rv2427c/proA:
(description and provenance of datasets)
| Rv2427c/proA | Rv3214/gpm2 | |
| Fe_supp_jason_reseq | 0.808 | 0.867 |
| low_pH_jason_reseq | 2.888 | 0.979 |
| NO_jason_reseq | 0.614 | -1.137 |
| B6_jason_reseq | -1.807 | 0.483 |
| MHCII_jason_reseq | -2.131 | -0.612 |
| Isoniazid02 | 0.0 | -1.104 |
| Rifampicin4 | 1.056 | -0.374 |
| Ethambutol3 | 1.186 | 4.243 |
| Meropenem3 | 1.313 | -0.04 |
| Vancomycin16 | -0.568 | -0.088 |
| Rv2680_day32 | -0.32 | 0.82 |
| H37Rv_KO_MarP | 1.349 | 0.246 |
| hypoxia_3wks | -3.353 | -1.878 |
| hypoxia_6wks | -1.516 | -0.311 |
| glycerol | -0.566 | -1.005 |
| cholesterol | -0.091 | 0.435 |
| AJ | -0.56 | -0.151 |
| Bibs02 | -1.695 | -2.015 |
| Bibs02c | -1.79 | -0.608 |
| BL6 | 0.337 | 0.42 |
| BL6a | 0.284 | 0.776 |
| BXD01 | 0.727 | 2.616 |
| BXD010 | 0.691 | 1.134 |
| BXD011 | 0.566 | 1.778 |
| BXD03 | 0.396 | 1.295 |
| BXD04 | 0.622 | 2.487 |
| BXD05 | 0.394 | 1.997 |
| BXD06 | 0.422 | 2.521 |
| BXD07 | 1.003 | 1.939 |
| BXD08 | 0.389 | 2.866 |
| BXD09 | 0.596 | 1.944 |
| CAST | 0.33 | 0.976 |
| CCcont | 1.214 | 0.754 |
| DS01 | -2.572 | -0.838 |
| DS02 | -2.368 | -1.442 |
| DS04 | -0.468 | -1.739 |
| DS0c | -2.011 | -0.456 |
| GP01 | 0.193 | -0.207 |
| GP02 | 0.369 | -0.686 |
| GP0c | 0.35 | 0.742 |
| NOD | -0.542 | 0.07 |
| NZO | 0.63 | 1.121 |
| PWK | 0.227 | -0.652 |
| H37Rv_KO_CtpC | 0.399 | -1.077 |
| H37Rv_KO_CtpD | -0.257 | -0.04 |
| H37Rv_KO_Rv1272 | 0.681 | 0.953 |
| H37Rv_KO_SugABC | 1.678 | 0.399 |
| H37Rv_KO_MbtN | 1.402 | -0.196 |
| Trans05 | 0.187 | 1.705 |
| macrophage_unactivated | -1.111 | -0.281 |
| IL1 | 0.208 | -1.299 |
| Rapamycin | -1.476 | -1.418 |
| Tcell | 0.987 | 0.772 |
| GMCSF | -1.011 | -1.347 |
| IFNab | -1.064 | -1.185 |
| IFNg | -0.551 | 0.307 |
| IFNg_GMCSF1 | -0.735 | -1.376 |
| Rv1432_day32 | -0.034 | 0.0 |
| Rv1565c_day32 | -1.75 | 0.044 |
| secA2_input | 0.135 | -3.572 |
| delta_Rv3594 | 0.096 | 0.746 |
| delta_Rv3717 | 1.022 | 1.616 |
| delta_Rv3811 | -0.623 | 1.666 |
| delta_Rv0954 | -1.928 | -1.213 |
| PonA1 | 0.403 | -0.386 |
| EccD1_KO | -0.5 | -1.845 |
| EspI_KO | -0.75 | -1.403 |
| PE35_KO | -0.601 | -2.824 |
| PPE68_KO | -1.126 | -1.872 |
| glycerol2 | -1.61 | -1.033 |
| lignocerate | -0.933 | -1.038 |
| oleate | -1.541 | -1.65 |
| phosphatidylcholine | -1.441 | -1.63 |
| acetate | 0.655 | 1.368 |
| glucAc | 0.555 | 0.864 |
| Rv0950ko | 1.52 | -0.332 |
| Rv1096ko | 1.797 | 0.651 |
| Rv3684ko | 1.88 | 1.916 |
| delta_otsA_trehalose | 2.25 | 0.466 |