Top 10 genes with highest correlation to Rv2427c/proA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3904c/esxE | (cc=0.5706) | info on Rv3904c/esxE |
| Rv3024c/trmU | (cc=0.55) | info on Rv3024c/trmU |
| Rv3214/gpm2 | (cc=0.5361) | info on Rv3214/gpm2 |
| Rv1593c/- | (cc=0.5155) | info on Rv1593c/- |
| Rv1239c/corA | (cc=0.512) | info on Rv1239c/corA |
| Rv3584/lpqE | (cc=0.5086) | info on Rv3584/lpqE |
| Rv0047c/- | (cc=0.4965) | info on Rv0047c/- |
| Rv0956/purN | (cc=0.4908) | info on Rv0956/purN |
| Rv3421c/- | (cc=0.4862) | info on Rv3421c/- |
| Rv2683/- | (cc=0.484) | info on Rv2683/- |
Correlation of Rv2427c/proA with Rv1593c/-
Normalized LFCs for Rv2427c/proA:
(description and provenance of datasets)
| Rv2427c/proA | Rv1593c/- | |
| Fe_supp_jason_reseq | 0.808 | 0.043 |
| low_pH_jason_reseq | 2.888 | 0.557 |
| NO_jason_reseq | 0.614 | 0.617 |
| B6_jason_reseq | -1.807 | 0.295 |
| MHCII_jason_reseq | -2.131 | -0.537 |
| Isoniazid02 | 0.0 | 0.0 |
| Rifampicin4 | 1.056 | 0.831 |
| Ethambutol3 | 1.186 | 1.021 |
| Meropenem3 | 1.313 | 1.105 |
| Vancomycin16 | -0.568 | 0.337 |
| Rv2680_day32 | -0.32 | -1.759 |
| H37Rv_KO_MarP | 1.349 | 0.69 |
| hypoxia_3wks | -3.353 | -1.192 |
| hypoxia_6wks | -1.516 | -0.679 |
| glycerol | -0.566 | -1.172 |
| cholesterol | -0.091 | -1.525 |
| AJ | -0.56 | -0.568 |
| Bibs02 | -1.695 | -1.004 |
| Bibs02c | -1.79 | -1.316 |
| BL6 | 0.337 | 1.101 |
| BL6a | 0.284 | 0.436 |
| BXD01 | 0.727 | 0.931 |
| BXD010 | 0.691 | 1.191 |
| BXD011 | 0.566 | 2.726 |
| BXD03 | 0.396 | 0.917 |
| BXD04 | 0.622 | 1.905 |
| BXD05 | 0.394 | 1.211 |
| BXD06 | 0.422 | 1.143 |
| BXD07 | 1.003 | 1.219 |
| BXD08 | 0.389 | 1.04 |
| BXD09 | 0.596 | 0.863 |
| CAST | 0.33 | 1.391 |
| CCcont | 1.214 | 0.486 |
| DS01 | -2.572 | -0.775 |
| DS02 | -2.368 | 0.479 |
| DS04 | -0.468 | 0.656 |
| DS0c | -2.011 | 0.152 |
| GP01 | 0.193 | 0.496 |
| GP02 | 0.369 | -0.383 |
| GP0c | 0.35 | 0.379 |
| NOD | -0.542 | -0.213 |
| NZO | 0.63 | 0.497 |
| PWK | 0.227 | 1.175 |
| H37Rv_KO_CtpC | 0.399 | 0.155 |
| H37Rv_KO_CtpD | -0.257 | 1.596 |
| H37Rv_KO_Rv1272 | 0.681 | -0.394 |
| H37Rv_KO_SugABC | 1.678 | 0.817 |
| H37Rv_KO_MbtN | 1.402 | -0.855 |
| Trans05 | 0.187 | 0.451 |
| macrophage_unactivated | -1.111 | -1.139 |
| IL1 | 0.208 | -0.392 |
| Rapamycin | -1.476 | -0.187 |
| Tcell | 0.987 | 0.433 |
| GMCSF | -1.011 | -0.124 |
| IFNab | -1.064 | -1.116 |
| IFNg | -0.551 | 0.139 |
| IFNg_GMCSF1 | -0.735 | -0.063 |
| Rv1432_day32 | -0.034 | -0.669 |
| Rv1565c_day32 | -1.75 | -2.267 |
| secA2_input | 0.135 | -0.808 |
| delta_Rv3594 | 0.096 | 0.266 |
| delta_Rv3717 | 1.022 | 0.03 |
| delta_Rv3811 | -0.623 | -0.898 |
| delta_Rv0954 | -1.928 | 0.463 |
| PonA1 | 0.403 | 0.214 |
| EccD1_KO | -0.5 | -0.497 |
| EspI_KO | -0.75 | -0.545 |
| PE35_KO | -0.601 | -0.327 |
| PPE68_KO | -1.126 | -0.154 |
| glycerol2 | -1.61 | -0.598 |
| lignocerate | -0.933 | 0.477 |
| oleate | -1.541 | -0.658 |
| phosphatidylcholine | -1.441 | 0.43 |
| acetate | 0.655 | 0.547 |
| glucAc | 0.555 | 0.37 |
| Rv0950ko | 1.52 | 1.052 |
| Rv1096ko | 1.797 | 0.82 |
| Rv3684ko | 1.88 | 0.891 |
| delta_otsA_trehalose | 2.25 | 0.081 |