Top 10 genes with highest correlation to Rv2427c/proA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3904c/esxE | (cc=0.5706) | info on Rv3904c/esxE |
| Rv3024c/trmU | (cc=0.55) | info on Rv3024c/trmU |
| Rv3214/gpm2 | (cc=0.5361) | info on Rv3214/gpm2 |
| Rv1593c/- | (cc=0.5155) | info on Rv1593c/- |
| Rv1239c/corA | (cc=0.512) | info on Rv1239c/corA |
| Rv3584/lpqE | (cc=0.5086) | info on Rv3584/lpqE |
| Rv0047c/- | (cc=0.4965) | info on Rv0047c/- |
| Rv0956/purN | (cc=0.4908) | info on Rv0956/purN |
| Rv3421c/- | (cc=0.4862) | info on Rv3421c/- |
| Rv2683/- | (cc=0.484) | info on Rv2683/- |
Correlation of Rv2427c/proA with Rv0047c/-
Normalized LFCs for Rv2427c/proA:
(description and provenance of datasets)
| Rv2427c/proA | Rv0047c/- | |
| Fe_supp_jason_reseq | 0.808 | -2.182 |
| low_pH_jason_reseq | 2.888 | 3.995 |
| NO_jason_reseq | 0.614 | 4.009 |
| B6_jason_reseq | -1.807 | 1.375 |
| MHCII_jason_reseq | -2.131 | -1.004 |
| Isoniazid02 | 0.0 | -0.469 |
| Rifampicin4 | 1.056 | -1.519 |
| Ethambutol3 | 1.186 | 2.698 |
| Meropenem3 | 1.313 | -2.017 |
| Vancomycin16 | -0.568 | -0.854 |
| Rv2680_day32 | -0.32 | -1.555 |
| H37Rv_KO_MarP | 1.349 | -2.135 |
| hypoxia_3wks | -3.353 | -2.153 |
| hypoxia_6wks | -1.516 | 2.742 |
| glycerol | -0.566 | -1.292 |
| cholesterol | -0.091 | -3.05 |
| AJ | -0.56 | 0.064 |
| Bibs02 | -1.695 | -3.399 |
| Bibs02c | -1.79 | -4.636 |
| BL6 | 0.337 | 0.41 |
| BL6a | 0.284 | 0.393 |
| BXD01 | 0.727 | 2.796 |
| BXD010 | 0.691 | 1.211 |
| BXD011 | 0.566 | 4.624 |
| BXD03 | 0.396 | 0.258 |
| BXD04 | 0.622 | 1.291 |
| BXD05 | 0.394 | 2.518 |
| BXD06 | 0.422 | 2.981 |
| BXD07 | 1.003 | 2.316 |
| BXD08 | 0.389 | 3.78 |
| BXD09 | 0.596 | 1.297 |
| CAST | 0.33 | 0.205 |
| CCcont | 1.214 | -0.493 |
| DS01 | -2.572 | -5.234 |
| DS02 | -2.368 | -4.819 |
| DS04 | -0.468 | -2.339 |
| DS0c | -2.011 | -2.461 |
| GP01 | 0.193 | 3.121 |
| GP02 | 0.369 | 0.487 |
| GP0c | 0.35 | 2.218 |
| NOD | -0.542 | -2.125 |
| NZO | 0.63 | 0.558 |
| PWK | 0.227 | 2.998 |
| H37Rv_KO_CtpC | 0.399 | -2.455 |
| H37Rv_KO_CtpD | -0.257 | 0.102 |
| H37Rv_KO_Rv1272 | 0.681 | -0.797 |
| H37Rv_KO_SugABC | 1.678 | 2.067 |
| H37Rv_KO_MbtN | 1.402 | 2.182 |
| Trans05 | 0.187 | 0.836 |
| macrophage_unactivated | -1.111 | -4.129 |
| IL1 | 0.208 | 0.163 |
| Rapamycin | -1.476 | -2.403 |
| Tcell | 0.987 | 0.603 |
| GMCSF | -1.011 | -3.501 |
| IFNab | -1.064 | -1.294 |
| IFNg | -0.551 | -1.849 |
| IFNg_GMCSF1 | -0.735 | -2.24 |
| Rv1432_day32 | -0.034 | -0.013 |
| Rv1565c_day32 | -1.75 | -4.786 |
| secA2_input | 0.135 | 0.504 |
| delta_Rv3594 | 0.096 | -0.399 |
| delta_Rv3717 | 1.022 | 1.969 |
| delta_Rv3811 | -0.623 | 0.419 |
| delta_Rv0954 | -1.928 | -0.37 |
| PonA1 | 0.403 | -1.716 |
| EccD1_KO | -0.5 | -1.227 |
| EspI_KO | -0.75 | -0.824 |
| PE35_KO | -0.601 | -1.855 |
| PPE68_KO | -1.126 | -1.952 |
| glycerol2 | -1.61 | 1.351 |
| lignocerate | -0.933 | -1.002 |
| oleate | -1.541 | 0.543 |
| phosphatidylcholine | -1.441 | 0.011 |
| acetate | 0.655 | -0.69 |
| glucAc | 0.555 | -1.622 |
| Rv0950ko | 1.52 | -0.675 |
| Rv1096ko | 1.797 | -1.137 |
| Rv3684ko | 1.88 | 2.315 |
| delta_otsA_trehalose | 2.25 | -1.257 |