Top 10 genes with highest correlation to Rv2424c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1367c/- | (cc=0.5961) | info on Rv1367c/- |
| Rv3055/- | (cc=0.5948) | info on Rv3055/- |
| Rv2786c/ribF | (cc=0.5633) | info on Rv2786c/ribF |
| Rv2177c/- | (cc=0.5495) | info on Rv2177c/- |
| Rv1250/- | (cc=0.5155) | info on Rv1250/- |
| Rv2980/- | (cc=0.5125) | info on Rv2980/- |
| Rv0520/- | (cc=0.5123) | info on Rv0520/- |
| Rv2915c/- | (cc=0.5113) | info on Rv2915c/- |
| Rv0895/- | (cc=0.5109) | info on Rv0895/- |
| Rv1735c/- | (cc=0.5061) | info on Rv1735c/- |
Correlation of Rv2424c/- with Rv2177c/-
Normalized LFCs for Rv2424c/-:
(description and provenance of datasets)
| Rv2424c/- | Rv2177c/- | |
| Fe_supp_jason_reseq | -0.701 | 0.011 |
| low_pH_jason_reseq | -1.082 | -1.226 |
| NO_jason_reseq | 0.349 | 0.302 |
| B6_jason_reseq | 0.996 | 0.386 |
| MHCII_jason_reseq | -0.668 | -0.305 |
| Isoniazid02 | -0.18 | -0.054 |
| Rifampicin4 | 0.875 | 1.162 |
| Ethambutol3 | 0.573 | 0.672 |
| Meropenem3 | 0.659 | 0.639 |
| Vancomycin16 | 0.645 | 0.504 |
| Rv2680_day32 | 0.043 | -0.169 |
| H37Rv_KO_MarP | 0.676 | -0.174 |
| hypoxia_3wks | -0.167 | 0.271 |
| hypoxia_6wks | 0.121 | 0.336 |
| glycerol | -1.287 | -0.312 |
| cholesterol | -0.457 | -0.143 |
| AJ | 0.913 | 0.948 |
| Bibs02 | -0.148 | -0.38 |
| Bibs02c | 0.196 | -0.394 |
| BL6 | 0.455 | -0.158 |
| BL6a | -0.29 | -0.205 |
| BXD01 | -0.276 | -0.61 |
| BXD010 | -0.559 | -0.632 |
| BXD011 | -0.513 | -0.555 |
| BXD03 | -0.213 | -0.386 |
| BXD04 | 0.063 | -0.057 |
| BXD05 | -0.628 | -0.039 |
| BXD06 | -0.469 | -0.068 |
| BXD07 | -0.288 | -0.227 |
| BXD08 | -0.209 | -0.352 |
| BXD09 | -0.242 | 0.067 |
| CAST | 0.295 | 0.494 |
| CCcont | -1.203 | -0.651 |
| DS01 | 0.33 | 0.417 |
| DS02 | 0.775 | 0.384 |
| DS04 | 0.864 | 1.362 |
| DS0c | 0.412 | -0.506 |
| GP01 | 0.121 | 1.28 |
| GP02 | 0.333 | 0.324 |
| GP0c | 0.623 | 1.16 |
| NOD | 0.413 | -0.028 |
| NZO | 0.909 | 0.88 |
| PWK | 0.645 | 0.861 |
| H37Rv_KO_CtpC | -0.184 | -0.189 |
| H37Rv_KO_CtpD | -0.777 | -0.601 |
| H37Rv_KO_Rv1272 | -0.222 | 0.397 |
| H37Rv_KO_SugABC | -0.344 | 0.481 |
| H37Rv_KO_MbtN | -1.569 | -1.489 |
| Trans05 | 1.084 | 1.047 |
| macrophage_unactivated | -0.407 | -0.887 |
| IL1 | -1.1 | -0.736 |
| Rapamycin | -0.93 | -0.126 |
| Tcell | -0.479 | -0.365 |
| GMCSF | 0.098 | 0.29 |
| IFNab | -0.937 | -0.538 |
| IFNg | -0.69 | -0.997 |
| IFNg_GMCSF1 | 0.148 | -0.352 |
| Rv1432_day32 | -0.03 | 0.245 |
| Rv1565c_day32 | 0.215 | -0.283 |
| secA2_input | 0.941 | 1.116 |
| delta_Rv3594 | -0.72 | -0.433 |
| delta_Rv3717 | -0.865 | -0.233 |
| delta_Rv3811 | -0.769 | -0.312 |
| delta_Rv0954 | -1.039 | -0.59 |
| PonA1 | -0.256 | -0.087 |
| EccD1_KO | 2.559 | -0.253 |
| EspI_KO | 1.657 | 0.225 |
| PE35_KO | 1.173 | -0.761 |
| PPE68_KO | 1.654 | -0.646 |
| glycerol2 | 0.184 | -0.017 |
| lignocerate | 0.183 | -0.029 |
| oleate | 0.604 | 0.301 |
| phosphatidylcholine | 0.794 | 0.283 |
| acetate | 0.357 | 0.735 |
| glucAc | -0.149 | 0.176 |
| Rv0950ko | -0.069 | -0.19 |
| Rv1096ko | -0.187 | -0.166 |
| Rv3684ko | -0.334 | -0.449 |
| delta_otsA_trehalose | -0.098 | -0.662 |