Top 10 genes with highest correlation to Rv2424c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1367c/- | (cc=0.5961) | info on Rv1367c/- |
| Rv3055/- | (cc=0.5948) | info on Rv3055/- |
| Rv2786c/ribF | (cc=0.5633) | info on Rv2786c/ribF |
| Rv2177c/- | (cc=0.5495) | info on Rv2177c/- |
| Rv1250/- | (cc=0.5155) | info on Rv1250/- |
| Rv2980/- | (cc=0.5125) | info on Rv2980/- |
| Rv0520/- | (cc=0.5123) | info on Rv0520/- |
| Rv2915c/- | (cc=0.5113) | info on Rv2915c/- |
| Rv0895/- | (cc=0.5109) | info on Rv0895/- |
| Rv1735c/- | (cc=0.5061) | info on Rv1735c/- |
Correlation of Rv2424c/- with Rv1735c/-
Normalized LFCs for Rv2424c/-:
(description and provenance of datasets)
| Rv2424c/- | Rv1735c/- | |
| Fe_supp_jason_reseq | -0.701 | -1.307 |
| low_pH_jason_reseq | -1.082 | -0.656 |
| NO_jason_reseq | 0.349 | 0.118 |
| B6_jason_reseq | 0.996 | -1.084 |
| MHCII_jason_reseq | -0.668 | 0.265 |
| Isoniazid02 | -0.18 | 1.275 |
| Rifampicin4 | 0.875 | 0.501 |
| Ethambutol3 | 0.573 | 0.916 |
| Meropenem3 | 0.659 | 0.264 |
| Vancomycin16 | 0.645 | 0.716 |
| Rv2680_day32 | 0.043 | 0.0 |
| H37Rv_KO_MarP | 0.676 | 0.559 |
| hypoxia_3wks | -0.167 | 0.578 |
| hypoxia_6wks | 0.121 | -1.825 |
| glycerol | -1.287 | -1.444 |
| cholesterol | -0.457 | -1.572 |
| AJ | 0.913 | 0.104 |
| Bibs02 | -0.148 | -0.66 |
| Bibs02c | 0.196 | -0.571 |
| BL6 | 0.455 | -2.2 |
| BL6a | -0.29 | -2.426 |
| BXD01 | -0.276 | -1.284 |
| BXD010 | -0.559 | -2.074 |
| BXD011 | -0.513 | -1.905 |
| BXD03 | -0.213 | -1.656 |
| BXD04 | 0.063 | 0.0 |
| BXD05 | -0.628 | -1.264 |
| BXD06 | -0.469 | -2.221 |
| BXD07 | -0.288 | -2.304 |
| BXD08 | -0.209 | -0.976 |
| BXD09 | -0.242 | -1.64 |
| CAST | 0.295 | 0.337 |
| CCcont | -1.203 | -2.554 |
| DS01 | 0.33 | -0.703 |
| DS02 | 0.775 | 0.928 |
| DS04 | 0.864 | 1.665 |
| DS0c | 0.412 | -0.102 |
| GP01 | 0.121 | 1.249 |
| GP02 | 0.333 | 1.619 |
| GP0c | 0.623 | -0.126 |
| NOD | 0.413 | 0.347 |
| NZO | 0.909 | -1.319 |
| PWK | 0.645 | 0.688 |
| H37Rv_KO_CtpC | -0.184 | 0.623 |
| H37Rv_KO_CtpD | -0.777 | -1.945 |
| H37Rv_KO_Rv1272 | -0.222 | 0.834 |
| H37Rv_KO_SugABC | -0.344 | -0.844 |
| H37Rv_KO_MbtN | -1.569 | -1.715 |
| Trans05 | 1.084 | -0.114 |
| macrophage_unactivated | -0.407 | -2.273 |
| IL1 | -1.1 | -3.283 |
| Rapamycin | -0.93 | -3.069 |
| Tcell | -0.479 | -2.076 |
| GMCSF | 0.098 | -2.778 |
| IFNab | -0.937 | -3.694 |
| IFNg | -0.69 | -2.536 |
| IFNg_GMCSF1 | 0.148 | -2.13 |
| Rv1432_day32 | -0.03 | 0.0 |
| Rv1565c_day32 | 0.215 | 1.238 |
| secA2_input | 0.941 | -0.429 |
| delta_Rv3594 | -0.72 | -0.832 |
| delta_Rv3717 | -0.865 | 0.165 |
| delta_Rv3811 | -0.769 | -0.61 |
| delta_Rv0954 | -1.039 | -1.499 |
| PonA1 | -0.256 | 0.092 |
| EccD1_KO | 2.559 | 0.793 |
| EspI_KO | 1.657 | -0.394 |
| PE35_KO | 1.173 | 0.435 |
| PPE68_KO | 1.654 | 1.901 |
| glycerol2 | 0.184 | -0.787 |
| lignocerate | 0.183 | -1.162 |
| oleate | 0.604 | -0.32 |
| phosphatidylcholine | 0.794 | -0.56 |
| acetate | 0.357 | -1.993 |
| glucAc | -0.149 | -2.721 |
| Rv0950ko | -0.069 | 1.001 |
| Rv1096ko | -0.187 | 1.454 |
| Rv3684ko | -0.334 | 1.15 |
| delta_otsA_trehalose | -0.098 | 0.564 |