Top 10 genes with highest correlation to Rv2407/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2701c/suhB | (cc=0.5303) | info on Rv2701c/suhB |
Rv3089/fadD13 | (cc=0.4985) | info on Rv3089/fadD13 |
Rv1737c/narK2 | (cc=0.4984) | info on Rv1737c/narK2 |
Rv0447c/ufaA1 | (cc=0.4979) | info on Rv0447c/ufaA1 |
Rv3585/radA | (cc=0.4947) | info on Rv3585/radA |
Rv1226c/- | (cc=0.4935) | info on Rv1226c/- |
Rv3265c/wbbL1 | (cc=0.4904) | info on Rv3265c/wbbL1 |
Rv1001/arcA | (cc=0.4887) | info on Rv1001/arcA |
Rv0969/ctpV | (cc=0.4782) | info on Rv0969/ctpV |
Rv2370c/- | (cc=0.4723) | info on Rv2370c/- |
Correlation of Rv2407/- with Rv0447c/ufaA1
Normalized LFCs for Rv2407/-:
(description and provenance of datasets)
Rv2407/- | Rv0447c/ufaA1 | |
Fe_supp_jason_reseq | -0.867 | -0.09 |
low_pH_jason_reseq | -0.539 | -0.622 |
NO_jason_reseq | 0.071 | 0.0 |
B6_jason_reseq | -0.483 | 0.083 |
MHCII_jason_reseq | 0.108 | 0.768 |
Isoniazid02 | 0.54 | -0.291 |
Rifampicin4 | 0.154 | -0.089 |
Ethambutol3 | 1.069 | 0.964 |
Meropenem3 | 0.627 | 0.211 |
Vancomycin16 | 0.608 | 0.0 |
Rv2680_day32 | 0.851 | 0.409 |
H37Rv_KO_MarP | -0.535 | -0.104 |
hypoxia_3wks | -0.152 | -0.179 |
hypoxia_6wks | -0.04 | -0.19 |
glycerol | -0.118 | -0.161 |
cholesterol | -0.351 | -0.147 |
AJ | -0.437 | -0.439 |
Bibs02 | 0.427 | 0.012 |
Bibs02c | -0.3 | -0.182 |
BL6 | -0.334 | -0.623 |
BL6a | -0.433 | -0.455 |
BXD01 | -0.348 | -0.86 |
BXD010 | 0.124 | -0.354 |
BXD011 | -0.259 | -0.523 |
BXD03 | -0.135 | -1.102 |
BXD04 | -1.257 | 0.169 |
BXD05 | 0.107 | -0.475 |
BXD06 | -0.532 | -0.73 |
BXD07 | -0.1 | -0.425 |
BXD08 | 0.175 | -0.345 |
BXD09 | 0.192 | 0.113 |
CAST | 0.128 | 0.038 |
CCcont | -0.424 | -0.843 |
DS01 | -0.373 | 0.181 |
DS02 | -0.249 | 0.323 |
DS04 | 0.492 | 0.26 |
DS0c | -0.526 | 0.014 |
GP01 | 1.309 | -0.406 |
GP02 | -0.195 | -0.157 |
GP0c | 0.276 | -0.842 |
NOD | 1.054 | 1.05 |
NZO | 0.217 | -0.238 |
PWK | 0.098 | 0.09 |
H37Rv_KO_CtpC | -0.14 | -0.499 |
H37Rv_KO_CtpD | 0.537 | -0.128 |
H37Rv_KO_Rv1272 | -0.037 | -0.36 |
H37Rv_KO_SugABC | 0.897 | -0.22 |
H37Rv_KO_MbtN | -0.125 | -0.855 |
Trans05 | 0.414 | -0.191 |
macrophage_unactivated | -0.716 | -0.114 |
IL1 | -0.353 | -0.125 |
Rapamycin | -0.15 | 0.331 |
Tcell | -0.189 | -0.684 |
GMCSF | -0.428 | -0.243 |
IFNab | -0.423 | -0.109 |
IFNg | 0.174 | -0.128 |
IFNg_GMCSF1 | 0.456 | 0.236 |
Rv1432_day32 | 0.623 | 0.94 |
Rv1565c_day32 | 0.33 | -0.216 |
secA2_input | 1.647 | 0.243 |
delta_Rv3594 | -0.168 | -0.369 |
delta_Rv3717 | 0.011 | -0.332 |
delta_Rv3811 | -0.294 | -0.079 |
delta_Rv0954 | -0.093 | 0.025 |
PonA1 | -0.361 | 0.158 |
EccD1_KO | 1.375 | 0.533 |
EspI_KO | 1.124 | 0.659 |
PE35_KO | 0.493 | -0.298 |
PPE68_KO | 0.541 | 0.106 |
glycerol2 | -0.105 | -0.092 |
lignocerate | -0.012 | -0.08 |
oleate | 0.238 | 0.319 |
phosphatidylcholine | 0.099 | -0.113 |
acetate | 0.151 | -0.012 |
glucAc | 0.144 | -0.436 |
Rv0950ko | 0.85 | 0.742 |
Rv1096ko | 0.787 | 0.992 |
Rv3684ko | 0.717 | 0.897 |
delta_otsA_trehalose | 1.7 | 0.461 |