Top 10 genes with highest correlation to Rv2360c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3136A/- | (cc=0.4792) | info on Rv3136A/- |
| Rv3230c/- | (cc=0.4568) | info on Rv3230c/- |
| Rv0757/phoP | (cc=0.4355) | info on Rv0757/phoP |
| Rv1168c/PPE17 | (cc=0.4321) | info on Rv1168c/PPE17 |
| Rv1319c/- | (cc=0.4257) | info on Rv1319c/- |
| Rv2081c/- | (cc=0.4199) | info on Rv2081c/- |
| Rv0962c/lprP | (cc=0.4166) | info on Rv0962c/lprP |
| Rv1321/- | (cc=0.4072) | info on Rv1321/- |
| Rv0758/phoR | (cc=0.4025) | info on Rv0758/phoR |
| Rv1989c/- | (cc=0.4025) | info on Rv1989c/- |
Correlation of Rv2360c/- with Rv3230c/-
Normalized LFCs for Rv2360c/-:
(description and provenance of datasets)
| Rv2360c/- | Rv3230c/- | |
| Fe_supp_jason_reseq | 0.167 | 1.118 |
| low_pH_jason_reseq | 1.777 | -2.28 |
| NO_jason_reseq | -0.704 | -0.845 |
| B6_jason_reseq | 1.686 | 0.018 |
| MHCII_jason_reseq | 0.171 | 0.613 |
| Isoniazid02 | 1.302 | 0.042 |
| Rifampicin4 | -0.087 | 0.658 |
| Ethambutol3 | 0.945 | 0.295 |
| Meropenem3 | 0.331 | -0.351 |
| Vancomycin16 | -0.191 | 0.838 |
| Rv2680_day32 | -0.214 | -0.428 |
| H37Rv_KO_MarP | 0.202 | -1.544 |
| hypoxia_3wks | 0.347 | 1.22 |
| hypoxia_6wks | 0.637 | -0.639 |
| glycerol | -2.345 | -4.991 |
| cholesterol | -1.121 | -2.671 |
| AJ | -0.424 | -0.822 |
| Bibs02 | -2.105 | -2.383 |
| Bibs02c | -2.216 | -2.902 |
| BL6 | -0.385 | -0.393 |
| BL6a | -0.544 | -1.967 |
| BXD01 | -0.004 | -1.526 |
| BXD010 | -0.69 | -0.935 |
| BXD011 | 0.079 | -0.42 |
| BXD03 | -0.434 | -1.709 |
| BXD04 | 0.239 | -1.516 |
| BXD05 | 0.043 | -0.7 |
| BXD06 | -0.477 | -1.326 |
| BXD07 | -0.14 | -1.482 |
| BXD08 | -0.12 | -1.17 |
| BXD09 | -0.103 | -1.416 |
| CAST | -0.113 | -0.911 |
| CCcont | -0.757 | -0.357 |
| DS01 | -1.114 | -2.046 |
| DS02 | -0.898 | -1.465 |
| DS04 | -0.746 | -0.238 |
| DS0c | -0.775 | -1.851 |
| GP01 | -0.576 | -1.483 |
| GP02 | 1.588 | -1.429 |
| GP0c | -0.39 | -1.832 |
| NOD | 0.789 | 0.0 |
| NZO | -1.477 | -0.433 |
| PWK | -0.604 | -0.034 |
| H37Rv_KO_CtpC | -0.911 | -2.325 |
| H37Rv_KO_CtpD | -0.193 | -0.35 |
| H37Rv_KO_Rv1272 | 0.096 | -0.306 |
| H37Rv_KO_SugABC | 0.044 | 0.54 |
| H37Rv_KO_MbtN | -0.44 | 0.386 |
| Trans05 | 0.438 | -1.065 |
| macrophage_unactivated | 0.032 | -0.054 |
| IL1 | 0.178 | 0.3 |
| Rapamycin | -0.276 | -1.587 |
| Tcell | -0.401 | -1.766 |
| GMCSF | -0.52 | -0.541 |
| IFNab | -0.157 | -0.384 |
| IFNg | -0.013 | 0.719 |
| IFNg_GMCSF1 | -1.043 | -0.399 |
| Rv1432_day32 | 1.206 | 0.226 |
| Rv1565c_day32 | 1.128 | -0.297 |
| secA2_input | -0.911 | -0.833 |
| delta_Rv3594 | -0.815 | -0.135 |
| delta_Rv3717 | -0.322 | -0.696 |
| delta_Rv3811 | -0.445 | -0.382 |
| delta_Rv0954 | 0.227 | 0.742 |
| PonA1 | 0.007 | -0.076 |
| EccD1_KO | 0.299 | -0.076 |
| EspI_KO | 0.505 | -0.827 |
| PE35_KO | 0.055 | -1.747 |
| PPE68_KO | 0.061 | -0.442 |
| glycerol2 | 0.471 | 0.0 |
| lignocerate | -0.419 | -1.011 |
| oleate | 0.922 | -0.425 |
| phosphatidylcholine | 0.0 | 0.399 |
| acetate | -0.552 | -1.25 |
| glucAc | -1.291 | -1.735 |
| Rv0950ko | 0.648 | -0.401 |
| Rv1096ko | -0.377 | -0.217 |
| Rv3684ko | -1.113 | 0.783 |
| delta_otsA_trehalose | 0.758 | 0.564 |