Top 10 genes with highest correlation to Rv2360c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3136A/- | (cc=0.4792) | info on Rv3136A/- |
| Rv3230c/- | (cc=0.4568) | info on Rv3230c/- |
| Rv0757/phoP | (cc=0.4355) | info on Rv0757/phoP |
| Rv1168c/PPE17 | (cc=0.4321) | info on Rv1168c/PPE17 |
| Rv1319c/- | (cc=0.4257) | info on Rv1319c/- |
| Rv2081c/- | (cc=0.4199) | info on Rv2081c/- |
| Rv0962c/lprP | (cc=0.4166) | info on Rv0962c/lprP |
| Rv1321/- | (cc=0.4072) | info on Rv1321/- |
| Rv0758/phoR | (cc=0.4025) | info on Rv0758/phoR |
| Rv1989c/- | (cc=0.4025) | info on Rv1989c/- |
Correlation of Rv2360c/- with Rv1989c/-
Normalized LFCs for Rv2360c/-:
(description and provenance of datasets)
| Rv2360c/- | Rv1989c/- | |
| Fe_supp_jason_reseq | 0.167 | -0.633 |
| low_pH_jason_reseq | 1.777 | -0.243 |
| NO_jason_reseq | -0.704 | 0.446 |
| B6_jason_reseq | 1.686 | 0.514 |
| MHCII_jason_reseq | 0.171 | 0.217 |
| Isoniazid02 | 1.302 | 0.499 |
| Rifampicin4 | -0.087 | -0.915 |
| Ethambutol3 | 0.945 | 0.931 |
| Meropenem3 | 0.331 | -0.738 |
| Vancomycin16 | -0.191 | -0.26 |
| Rv2680_day32 | -0.214 | 0.615 |
| H37Rv_KO_MarP | 0.202 | 0.049 |
| hypoxia_3wks | 0.347 | -0.187 |
| hypoxia_6wks | 0.637 | -0.221 |
| glycerol | -2.345 | -1.791 |
| cholesterol | -1.121 | -0.893 |
| AJ | -0.424 | -0.034 |
| Bibs02 | -2.105 | 0.442 |
| Bibs02c | -2.216 | 0.138 |
| BL6 | -0.385 | -1.171 |
| BL6a | -0.544 | -0.36 |
| BXD01 | -0.004 | -0.451 |
| BXD010 | -0.69 | -1.432 |
| BXD011 | 0.079 | -0.947 |
| BXD03 | -0.434 | -0.586 |
| BXD04 | 0.239 | -0.24 |
| BXD05 | 0.043 | -0.529 |
| BXD06 | -0.477 | -1.085 |
| BXD07 | -0.14 | -0.764 |
| BXD08 | -0.12 | -0.912 |
| BXD09 | -0.103 | -0.975 |
| CAST | -0.113 | -0.087 |
| CCcont | -0.757 | -1.18 |
| DS01 | -1.114 | -0.05 |
| DS02 | -0.898 | 0.314 |
| DS04 | -0.746 | 0.008 |
| DS0c | -0.775 | -0.041 |
| GP01 | -0.576 | 0.022 |
| GP02 | 1.588 | 1.252 |
| GP0c | -0.39 | -0.335 |
| NOD | 0.789 | 0.221 |
| NZO | -1.477 | -0.452 |
| PWK | -0.604 | -0.121 |
| H37Rv_KO_CtpC | -0.911 | -0.824 |
| H37Rv_KO_CtpD | -0.193 | -0.613 |
| H37Rv_KO_Rv1272 | 0.096 | 0.126 |
| H37Rv_KO_SugABC | 0.044 | -0.039 |
| H37Rv_KO_MbtN | -0.44 | 0.025 |
| Trans05 | 0.438 | 0.533 |
| macrophage_unactivated | 0.032 | -0.546 |
| IL1 | 0.178 | -1.056 |
| Rapamycin | -0.276 | -1.114 |
| Tcell | -0.401 | -0.564 |
| GMCSF | -0.52 | -0.826 |
| IFNab | -0.157 | -0.602 |
| IFNg | -0.013 | 0.219 |
| IFNg_GMCSF1 | -1.043 | 0.053 |
| Rv1432_day32 | 1.206 | 0.493 |
| Rv1565c_day32 | 1.128 | 0.548 |
| secA2_input | -0.911 | -0.888 |
| delta_Rv3594 | -0.815 | 0.85 |
| delta_Rv3717 | -0.322 | 0.337 |
| delta_Rv3811 | -0.445 | 0.573 |
| delta_Rv0954 | 0.227 | 0.417 |
| PonA1 | 0.007 | 0.083 |
| EccD1_KO | 0.299 | 0.661 |
| EspI_KO | 0.505 | -0.114 |
| PE35_KO | 0.055 | 0.248 |
| PPE68_KO | 0.061 | -0.128 |
| glycerol2 | 0.471 | 0.083 |
| lignocerate | -0.419 | 0.153 |
| oleate | 0.922 | 0.349 |
| phosphatidylcholine | 0.0 | 0.218 |
| acetate | -0.552 | -0.472 |
| glucAc | -1.291 | -0.616 |
| Rv0950ko | 0.648 | 0.28 |
| Rv1096ko | -0.377 | 0.057 |
| Rv3684ko | -1.113 | -0.377 |
| delta_otsA_trehalose | 0.758 | 1.837 |