Top 10 genes with highest correlation to Rv2360c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3136A/- | (cc=0.4792) | info on Rv3136A/- |
| Rv3230c/- | (cc=0.4568) | info on Rv3230c/- |
| Rv0757/phoP | (cc=0.4355) | info on Rv0757/phoP |
| Rv1168c/PPE17 | (cc=0.4321) | info on Rv1168c/PPE17 |
| Rv1319c/- | (cc=0.4257) | info on Rv1319c/- |
| Rv2081c/- | (cc=0.4199) | info on Rv2081c/- |
| Rv0962c/lprP | (cc=0.4166) | info on Rv0962c/lprP |
| Rv1321/- | (cc=0.4072) | info on Rv1321/- |
| Rv0758/phoR | (cc=0.4025) | info on Rv0758/phoR |
| Rv1989c/- | (cc=0.4025) | info on Rv1989c/- |
Correlation of Rv2360c/- with Rv3136A/-
Normalized LFCs for Rv2360c/-:
(description and provenance of datasets)
| Rv2360c/- | Rv3136A/- | |
| Fe_supp_jason_reseq | 0.167 | 1.127 |
| low_pH_jason_reseq | 1.777 | -0.478 |
| NO_jason_reseq | -0.704 | 0.179 |
| B6_jason_reseq | 1.686 | 0.81 |
| MHCII_jason_reseq | 0.171 | 0.619 |
| Isoniazid02 | 1.302 | 2.03 |
| Rifampicin4 | -0.087 | 0.0 |
| Ethambutol3 | 0.945 | 2.81 |
| Meropenem3 | 0.331 | 2.511 |
| Vancomycin16 | -0.191 | -0.692 |
| Rv2680_day32 | -0.214 | 0.279 |
| H37Rv_KO_MarP | 0.202 | 1.388 |
| hypoxia_3wks | 0.347 | 0.231 |
| hypoxia_6wks | 0.637 | -0.898 |
| glycerol | -2.345 | -2.093 |
| cholesterol | -1.121 | -1.879 |
| AJ | -0.424 | -1.138 |
| Bibs02 | -2.105 | -0.8 |
| Bibs02c | -2.216 | -0.72 |
| BL6 | -0.385 | -1.346 |
| BL6a | -0.544 | -1.179 |
| BXD01 | -0.004 | -1.104 |
| BXD010 | -0.69 | -1.484 |
| BXD011 | 0.079 | -1.203 |
| BXD03 | -0.434 | -1.241 |
| BXD04 | 0.239 | -0.514 |
| BXD05 | 0.043 | -1.319 |
| BXD06 | -0.477 | -1.018 |
| BXD07 | -0.14 | -1.37 |
| BXD08 | -0.12 | -1.227 |
| BXD09 | -0.103 | -1.377 |
| CAST | -0.113 | -0.45 |
| CCcont | -0.757 | -1.683 |
| DS01 | -1.114 | -1.489 |
| DS02 | -0.898 | -0.975 |
| DS04 | -0.746 | -0.696 |
| DS0c | -0.775 | -1.326 |
| GP01 | -0.576 | -0.861 |
| GP02 | 1.588 | 0.397 |
| GP0c | -0.39 | -2.4 |
| NOD | 0.789 | -0.07 |
| NZO | -1.477 | -0.548 |
| PWK | -0.604 | -0.594 |
| H37Rv_KO_CtpC | -0.911 | -0.46 |
| H37Rv_KO_CtpD | -0.193 | -0.966 |
| H37Rv_KO_Rv1272 | 0.096 | -1.468 |
| H37Rv_KO_SugABC | 0.044 | -0.222 |
| H37Rv_KO_MbtN | -0.44 | -1.743 |
| Trans05 | 0.438 | -0.575 |
| macrophage_unactivated | 0.032 | -1.092 |
| IL1 | 0.178 | -1.071 |
| Rapamycin | -0.276 | -1.608 |
| Tcell | -0.401 | -0.678 |
| GMCSF | -0.52 | -0.782 |
| IFNab | -0.157 | -2.279 |
| IFNg | -0.013 | -1.208 |
| IFNg_GMCSF1 | -1.043 | -0.93 |
| Rv1432_day32 | 1.206 | 0.819 |
| Rv1565c_day32 | 1.128 | -0.333 |
| secA2_input | -0.911 | 0.161 |
| delta_Rv3594 | -0.815 | -0.344 |
| delta_Rv3717 | -0.322 | -1.354 |
| delta_Rv3811 | -0.445 | -0.413 |
| delta_Rv0954 | 0.227 | -0.16 |
| PonA1 | 0.007 | 0.132 |
| EccD1_KO | 0.299 | 0.151 |
| EspI_KO | 0.505 | -0.416 |
| PE35_KO | 0.055 | 0.925 |
| PPE68_KO | 0.061 | 0.771 |
| glycerol2 | 0.471 | 0.186 |
| lignocerate | -0.419 | -0.486 |
| oleate | 0.922 | 0.319 |
| phosphatidylcholine | 0.0 | -0.02 |
| acetate | -0.552 | 0.047 |
| glucAc | -1.291 | 0.104 |
| Rv0950ko | 0.648 | -0.422 |
| Rv1096ko | -0.377 | -0.648 |
| Rv3684ko | -1.113 | -1.215 |
| delta_otsA_trehalose | 0.758 | -0.196 |