Top 10 genes with highest correlation to Rv2276/cyp121:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3112/moaD1 | (cc=0.608) | info on Rv3112/moaD1 |
| Rv2253/- | (cc=0.606) | info on Rv2253/- |
| Rv2119/- | (cc=0.5777) | info on Rv2119/- |
| Rv2816c/- | (cc=0.5751) | info on Rv2816c/- |
| Rv0698/- | (cc=0.5722) | info on Rv0698/- |
| Rv0596c/vapB4 | (cc=0.5715) | info on Rv0596c/vapB4 |
| Rv2267c/- | (cc=0.5628) | info on Rv2267c/- |
| Rv2562/- | (cc=0.5556) | info on Rv2562/- |
| Rv0945/- | (cc=0.5409) | info on Rv0945/- |
| Rv0055/rpsR1 | (cc=0.5396) | info on Rv0055/rpsR1 |
Correlation of Rv2276/cyp121 with Rv2253/-
Normalized LFCs for Rv2276/cyp121:
(description and provenance of datasets)
| Rv2276/cyp121 | Rv2253/- | |
| Fe_supp_jason_reseq | 0.439 | -1.163 |
| low_pH_jason_reseq | -0.052 | -0.206 |
| NO_jason_reseq | -0.806 | -0.475 |
| B6_jason_reseq | -0.341 | -2.027 |
| MHCII_jason_reseq | 0.367 | -1.199 |
| Isoniazid02 | -0.042 | -0.095 |
| Rifampicin4 | -0.241 | -0.845 |
| Ethambutol3 | -0.306 | -0.304 |
| Meropenem3 | -0.474 | -0.432 |
| Vancomycin16 | 0.223 | -0.172 |
| Rv2680_day32 | -0.449 | 0.456 |
| H37Rv_KO_MarP | -0.26 | -0.167 |
| hypoxia_3wks | -0.403 | 0.167 |
| hypoxia_6wks | -1.247 | -0.867 |
| glycerol | 0.237 | -0.903 |
| cholesterol | 0.233 | -0.807 |
| AJ | 1.133 | 1.758 |
| Bibs02 | 0.55 | 0.719 |
| Bibs02c | -0.277 | -0.418 |
| BL6 | 1.637 | 0.656 |
| BL6a | 0.936 | -0.626 |
| BXD01 | 1.007 | 1.271 |
| BXD010 | 0.564 | 0.707 |
| BXD011 | 0.581 | 0.54 |
| BXD03 | 1.281 | 0.327 |
| BXD04 | 1.013 | 0.407 |
| BXD05 | 0.888 | 0.301 |
| BXD06 | 1.393 | 0.483 |
| BXD07 | 0.491 | 0.259 |
| BXD08 | 1.581 | 1.186 |
| BXD09 | 1.36 | 0.462 |
| CAST | 0.42 | 0.102 |
| CCcont | 1.89 | 1.443 |
| DS01 | 0.479 | 0.395 |
| DS02 | 0.158 | -0.495 |
| DS04 | 0.472 | 1.269 |
| DS0c | 0.693 | -0.823 |
| GP01 | 0.678 | -0.119 |
| GP02 | -0.384 | -0.603 |
| GP0c | 0.094 | -0.333 |
| NOD | 1.988 | 2.791 |
| NZO | 0.097 | 1.305 |
| PWK | 0.142 | -0.287 |
| H37Rv_KO_CtpC | 1.918 | 1.54 |
| H37Rv_KO_CtpD | 0.516 | 1.877 |
| H37Rv_KO_Rv1272 | 0.931 | 1.952 |
| H37Rv_KO_SugABC | 1.332 | 1.701 |
| H37Rv_KO_MbtN | -0.108 | 0.452 |
| Trans05 | 1.265 | 2.427 |
| macrophage_unactivated | 0.859 | 0.915 |
| IL1 | -0.617 | -1.077 |
| Rapamycin | -0.338 | -2.829 |
| Tcell | 0.541 | 1.049 |
| GMCSF | -0.444 | -2.857 |
| IFNab | -0.109 | -0.943 |
| IFNg | 0.045 | -0.703 |
| IFNg_GMCSF1 | -0.226 | -1.141 |
| Rv1432_day32 | -0.143 | 1.096 |
| Rv1565c_day32 | -0.599 | 0.141 |
| secA2_input | -1.486 | -0.366 |
| delta_Rv3594 | -0.623 | 0.445 |
| delta_Rv3717 | -1.106 | -0.505 |
| delta_Rv3811 | 0.44 | -0.152 |
| delta_Rv0954 | -0.441 | -0.668 |
| PonA1 | 0.684 | -0.32 |
| EccD1_KO | 0.21 | -0.125 |
| EspI_KO | 2.193 | 0.502 |
| PE35_KO | 2.129 | 0.417 |
| PPE68_KO | 1.872 | -0.246 |
| glycerol2 | 1.864 | 1.26 |
| lignocerate | 2.12 | 1.393 |
| oleate | 0.169 | 0.664 |
| phosphatidylcholine | 1.84 | 1.259 |
| acetate | 2.369 | 1.413 |
| glucAc | 1.957 | 0.939 |
| Rv0950ko | 0.06 | -0.576 |
| Rv1096ko | 0.06 | -1.007 |
| Rv3684ko | -0.416 | -0.626 |
| delta_otsA_trehalose | 1.275 | -0.026 |