Top 10 genes with highest correlation to Rv2276/cyp121:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3112/moaD1 | (cc=0.608) | info on Rv3112/moaD1 |
| Rv2253/- | (cc=0.606) | info on Rv2253/- |
| Rv2119/- | (cc=0.5777) | info on Rv2119/- |
| Rv2816c/- | (cc=0.5751) | info on Rv2816c/- |
| Rv0698/- | (cc=0.5722) | info on Rv0698/- |
| Rv0596c/vapB4 | (cc=0.5715) | info on Rv0596c/vapB4 |
| Rv2267c/- | (cc=0.5628) | info on Rv2267c/- |
| Rv2562/- | (cc=0.5556) | info on Rv2562/- |
| Rv0945/- | (cc=0.5409) | info on Rv0945/- |
| Rv0055/rpsR1 | (cc=0.5396) | info on Rv0055/rpsR1 |
Correlation of Rv2276/cyp121 with Rv0055/rpsR1
Normalized LFCs for Rv2276/cyp121:
(description and provenance of datasets)
| Rv2276/cyp121 | Rv0055/rpsR1 | |
| Fe_supp_jason_reseq | 0.439 | -1.37 |
| low_pH_jason_reseq | -0.052 | 3.369 |
| NO_jason_reseq | -0.806 | 2.57 |
| B6_jason_reseq | -0.341 | -0.657 |
| MHCII_jason_reseq | 0.367 | 1.143 |
| Isoniazid02 | -0.042 | 2.663 |
| Rifampicin4 | -0.241 | 0.902 |
| Ethambutol3 | -0.306 | -0.441 |
| Meropenem3 | -0.474 | 0.763 |
| Vancomycin16 | 0.223 | -0.294 |
| Rv2680_day32 | -0.449 | 0.109 |
| H37Rv_KO_MarP | -0.26 | -1.325 |
| hypoxia_3wks | -0.403 | -0.678 |
| hypoxia_6wks | -1.247 | 0.084 |
| glycerol | 0.237 | 0.97 |
| cholesterol | 0.233 | -0.276 |
| AJ | 1.133 | 0.983 |
| Bibs02 | 0.55 | 0.0 |
| Bibs02c | -0.277 | 0.336 |
| BL6 | 1.637 | 3.526 |
| BL6a | 0.936 | 3.297 |
| BXD01 | 1.007 | 5.013 |
| BXD010 | 0.564 | 4.197 |
| BXD011 | 0.581 | 5.786 |
| BXD03 | 1.281 | 3.889 |
| BXD04 | 1.013 | 6.0 |
| BXD05 | 0.888 | 4.896 |
| BXD06 | 1.393 | 4.527 |
| BXD07 | 0.491 | 4.203 |
| BXD08 | 1.581 | 5.838 |
| BXD09 | 1.36 | 4.442 |
| CAST | 0.42 | 3.287 |
| CCcont | 1.89 | 3.633 |
| DS01 | 0.479 | 1.381 |
| DS02 | 0.158 | 0.181 |
| DS04 | 0.472 | -0.177 |
| DS0c | 0.693 | 0.0 |
| GP01 | 0.678 | -0.188 |
| GP02 | -0.384 | 0.0 |
| GP0c | 0.094 | -0.248 |
| NOD | 1.988 | 3.817 |
| NZO | 0.097 | -0.182 |
| PWK | 0.142 | 3.083 |
| H37Rv_KO_CtpC | 1.918 | 1.611 |
| H37Rv_KO_CtpD | 0.516 | 1.594 |
| H37Rv_KO_Rv1272 | 0.931 | 2.661 |
| H37Rv_KO_SugABC | 1.332 | -0.189 |
| H37Rv_KO_MbtN | -0.108 | 1.153 |
| Trans05 | 1.265 | 3.074 |
| macrophage_unactivated | 0.859 | 0.0 |
| IL1 | -0.617 | -0.54 |
| Rapamycin | -0.338 | -0.077 |
| Tcell | 0.541 | 1.717 |
| GMCSF | -0.444 | -1.677 |
| IFNab | -0.109 | -0.076 |
| IFNg | 0.045 | -1.31 |
| IFNg_GMCSF1 | -0.226 | -2.916 |
| Rv1432_day32 | -0.143 | 0.0 |
| Rv1565c_day32 | -0.599 | -0.415 |
| secA2_input | -1.486 | 0.997 |
| delta_Rv3594 | -0.623 | -0.812 |
| delta_Rv3717 | -1.106 | -4.252 |
| delta_Rv3811 | 0.44 | -0.106 |
| delta_Rv0954 | -0.441 | -4.366 |
| PonA1 | 0.684 | -1.721 |
| EccD1_KO | 0.21 | -2.578 |
| EspI_KO | 2.193 | 0.0 |
| PE35_KO | 2.129 | 0.134 |
| PPE68_KO | 1.872 | 0.941 |
| glycerol2 | 1.864 | 2.948 |
| lignocerate | 2.12 | 3.955 |
| oleate | 0.169 | -1.418 |
| phosphatidylcholine | 1.84 | 3.751 |
| acetate | 2.369 | 4.357 |
| glucAc | 1.957 | 3.813 |
| Rv0950ko | 0.06 | -0.944 |
| Rv1096ko | 0.06 | -1.08 |
| Rv3684ko | -0.416 | 2.391 |
| delta_otsA_trehalose | 1.275 | 0.0 |