Top 10 genes with highest correlation to Rv2260/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0630c/recB | (cc=0.4165) | info on Rv0630c/recB |
| Rv3293/pcd | (cc=0.4095) | info on Rv3293/pcd |
| Rv1864c/- | (cc=0.3981) | info on Rv1864c/- |
| Rv2200c/ctaC | (cc=0.3895) | info on Rv2200c/ctaC |
| Rv3284/- | (cc=0.3878) | info on Rv3284/- |
| Rv3265c/wbbL1 | (cc=0.3839) | info on Rv3265c/wbbL1 |
| Rv3519/- | (cc=0.3831) | info on Rv3519/- |
| Rv0067c/- | (cc=0.3829) | info on Rv0067c/- |
| Rv1934c/fadE17 | (cc=0.3808) | info on Rv1934c/fadE17 |
| Rv1138c/- | (cc=0.3776) | info on Rv1138c/- |
Correlation of Rv2260/- with Rv3519/-
Normalized LFCs for Rv2260/-:
(description and provenance of datasets)
| Rv2260/- | Rv3519/- | |
| Fe_supp_jason_reseq | 0.344 | -0.436 |
| low_pH_jason_reseq | -1.266 | 0.03 |
| NO_jason_reseq | 0.152 | 0.803 |
| B6_jason_reseq | 1.759 | 0.639 |
| MHCII_jason_reseq | 1.227 | 0.692 |
| Isoniazid02 | -0.247 | -0.342 |
| Rifampicin4 | -0.46 | 0.466 |
| Ethambutol3 | -0.57 | 0.154 |
| Meropenem3 | -0.63 | -0.535 |
| Vancomycin16 | 0.0 | -0.271 |
| Rv2680_day32 | 1.332 | 0.428 |
| H37Rv_KO_MarP | 0.0 | -0.502 |
| hypoxia_3wks | -0.594 | -0.805 |
| hypoxia_6wks | -0.246 | 0.816 |
| glycerol | 1.709 | 0.295 |
| cholesterol | 0.302 | -0.374 |
| AJ | -0.373 | 0.074 |
| Bibs02 | 1.48 | -0.073 |
| Bibs02c | 0.74 | 0.388 |
| BL6 | -0.856 | -0.12 |
| BL6a | 0.456 | 0.232 |
| BXD01 | -1.427 | -0.449 |
| BXD010 | -2.103 | -0.299 |
| BXD011 | 0.178 | -0.318 |
| BXD03 | 0.542 | -0.455 |
| BXD04 | -0.638 | 0.159 |
| BXD05 | -0.26 | -0.857 |
| BXD06 | -0.521 | 0.195 |
| BXD07 | 0.334 | -0.709 |
| BXD08 | -0.657 | -0.496 |
| BXD09 | -0.664 | 0.063 |
| CAST | -1.517 | -0.576 |
| CCcont | -0.442 | -0.718 |
| DS01 | 0.358 | 0.062 |
| DS02 | 0.277 | 0.378 |
| DS04 | -0.44 | 0.691 |
| DS0c | 0.25 | 0.793 |
| GP01 | 0.184 | 0.505 |
| GP02 | -0.011 | 0.862 |
| GP0c | 0.447 | -0.017 |
| NOD | 1.118 | -1.058 |
| NZO | -1.704 | -1.27 |
| PWK | -0.728 | -0.173 |
| H37Rv_KO_CtpC | 0.022 | -0.392 |
| H37Rv_KO_CtpD | 1.372 | 0.683 |
| H37Rv_KO_Rv1272 | -0.523 | -0.284 |
| H37Rv_KO_SugABC | 0.271 | 0.038 |
| H37Rv_KO_MbtN | 1.277 | 0.915 |
| Trans05 | -0.111 | -0.009 |
| macrophage_unactivated | -1.471 | 0.148 |
| IL1 | -0.522 | 0.833 |
| Rapamycin | 2.105 | 0.583 |
| Tcell | -0.055 | 0.753 |
| GMCSF | 0.296 | 0.333 |
| IFNab | -0.257 | 0.278 |
| IFNg | -0.045 | 0.278 |
| IFNg_GMCSF1 | 0.94 | -0.6 |
| Rv1432_day32 | -0.164 | -0.562 |
| Rv1565c_day32 | 0.583 | 0.441 |
| secA2_input | -2.819 | -0.225 |
| delta_Rv3594 | 0.324 | -0.15 |
| delta_Rv3717 | -1.258 | -0.802 |
| delta_Rv3811 | -1.324 | -0.705 |
| delta_Rv0954 | -0.935 | -0.373 |
| PonA1 | -0.45 | -0.104 |
| EccD1_KO | 0.839 | 1.898 |
| EspI_KO | -0.493 | 2.002 |
| PE35_KO | 0.198 | 1.065 |
| PPE68_KO | 1.059 | 0.982 |
| glycerol2 | -1.307 | -0.383 |
| lignocerate | -0.591 | -0.258 |
| oleate | -1.517 | -0.267 |
| phosphatidylcholine | -1.13 | -0.231 |
| acetate | -0.652 | -0.07 |
| glucAc | 0.718 | -0.363 |
| Rv0950ko | 0.627 | 0.38 |
| Rv1096ko | 2.147 | 1.348 |
| Rv3684ko | 2.129 | -0.236 |
| delta_otsA_trehalose | -0.068 | -0.576 |