Top 10 genes with highest correlation to Rv2260/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0630c/recB | (cc=0.4165) | info on Rv0630c/recB |
| Rv3293/pcd | (cc=0.4095) | info on Rv3293/pcd |
| Rv1864c/- | (cc=0.3981) | info on Rv1864c/- |
| Rv2200c/ctaC | (cc=0.3895) | info on Rv2200c/ctaC |
| Rv3284/- | (cc=0.3878) | info on Rv3284/- |
| Rv3265c/wbbL1 | (cc=0.3839) | info on Rv3265c/wbbL1 |
| Rv3519/- | (cc=0.3831) | info on Rv3519/- |
| Rv0067c/- | (cc=0.3829) | info on Rv0067c/- |
| Rv1934c/fadE17 | (cc=0.3808) | info on Rv1934c/fadE17 |
| Rv1138c/- | (cc=0.3776) | info on Rv1138c/- |
Correlation of Rv2260/- with Rv3293/pcd
Normalized LFCs for Rv2260/-:
(description and provenance of datasets)
| Rv2260/- | Rv3293/pcd | |
| Fe_supp_jason_reseq | 0.344 | -0.624 |
| low_pH_jason_reseq | -1.266 | 0.216 |
| NO_jason_reseq | 0.152 | 0.339 |
| B6_jason_reseq | 1.759 | 1.237 |
| MHCII_jason_reseq | 1.227 | 0.486 |
| Isoniazid02 | -0.247 | -1.072 |
| Rifampicin4 | -0.46 | 0.024 |
| Ethambutol3 | -0.57 | -0.989 |
| Meropenem3 | -0.63 | -0.474 |
| Vancomycin16 | 0.0 | -0.531 |
| Rv2680_day32 | 1.332 | 0.49 |
| H37Rv_KO_MarP | 0.0 | -0.363 |
| hypoxia_3wks | -0.594 | -1.037 |
| hypoxia_6wks | -0.246 | -0.52 |
| glycerol | 1.709 | -0.607 |
| cholesterol | 0.302 | -0.222 |
| AJ | -0.373 | -0.118 |
| Bibs02 | 1.48 | 0.511 |
| Bibs02c | 0.74 | 0.859 |
| BL6 | -0.856 | -0.66 |
| BL6a | 0.456 | 0.178 |
| BXD01 | -1.427 | -0.052 |
| BXD010 | -2.103 | -0.038 |
| BXD011 | 0.178 | -0.682 |
| BXD03 | 0.542 | -0.033 |
| BXD04 | -0.638 | -0.397 |
| BXD05 | -0.26 | -0.294 |
| BXD06 | -0.521 | 0.033 |
| BXD07 | 0.334 | -0.099 |
| BXD08 | -0.657 | 0.0 |
| BXD09 | -0.664 | -0.508 |
| CAST | -1.517 | 0.185 |
| CCcont | -0.442 | -0.429 |
| DS01 | 0.358 | 0.849 |
| DS02 | 0.277 | 0.356 |
| DS04 | -0.44 | 0.156 |
| DS0c | 0.25 | -0.284 |
| GP01 | 0.184 | -0.24 |
| GP02 | -0.011 | -0.586 |
| GP0c | 0.447 | 0.146 |
| NOD | 1.118 | -0.69 |
| NZO | -1.704 | -1.169 |
| PWK | -0.728 | -0.602 |
| H37Rv_KO_CtpC | 0.022 | 0.448 |
| H37Rv_KO_CtpD | 1.372 | 0.537 |
| H37Rv_KO_Rv1272 | -0.523 | -0.274 |
| H37Rv_KO_SugABC | 0.271 | 0.239 |
| H37Rv_KO_MbtN | 1.277 | 0.252 |
| Trans05 | -0.111 | 0.112 |
| macrophage_unactivated | -1.471 | -0.234 |
| IL1 | -0.522 | -0.11 |
| Rapamycin | 2.105 | 0.163 |
| Tcell | -0.055 | -0.56 |
| GMCSF | 0.296 | 0.116 |
| IFNab | -0.257 | -0.224 |
| IFNg | -0.045 | -0.516 |
| IFNg_GMCSF1 | 0.94 | 0.085 |
| Rv1432_day32 | -0.164 | 0.945 |
| Rv1565c_day32 | 0.583 | 0.542 |
| secA2_input | -2.819 | 0.014 |
| delta_Rv3594 | 0.324 | -0.806 |
| delta_Rv3717 | -1.258 | 0.093 |
| delta_Rv3811 | -1.324 | -0.813 |
| delta_Rv0954 | -0.935 | -0.669 |
| PonA1 | -0.45 | -0.563 |
| EccD1_KO | 0.839 | 0.178 |
| EspI_KO | -0.493 | 0.605 |
| PE35_KO | 0.198 | -0.053 |
| PPE68_KO | 1.059 | -0.147 |
| glycerol2 | -1.307 | -0.286 |
| lignocerate | -0.591 | 0.0 |
| oleate | -1.517 | -0.147 |
| phosphatidylcholine | -1.13 | -0.097 |
| acetate | -0.652 | 0.69 |
| glucAc | 0.718 | 0.601 |
| Rv0950ko | 0.627 | 0.392 |
| Rv1096ko | 2.147 | 1.493 |
| Rv3684ko | 2.129 | 0.357 |
| delta_otsA_trehalose | -0.068 | -0.461 |