TnSeqCorr

Top 10 genes with highest correlation to Rv2151c/ftsQ:

update plotcorrelationlink to info on gene
Rv3780/- (cc=0.5777) info on Rv3780/-
Rv2758c/vapB21 (cc=0.5313) info on Rv2758c/vapB21
Rv0945/- (cc=0.4976) info on Rv0945/-
Rv0062/celA1 (cc=0.4848) info on Rv0062/celA1
Rv1805c/- (cc=0.4823) info on Rv1805c/-
Rv2237/- (cc=0.4812) info on Rv2237/-
Rv2813/- (cc=0.4802) info on Rv2813/-
Rv2887/- (cc=0.4762) info on Rv2887/-
Rv1237/sugB (cc=0.4589) info on Rv1237/sugB
Rv1888c/- (cc=0.4569) info on Rv1888c/-

Correlation of Rv2151c/ftsQ with Rv2813/-

Normalized LFCs for Rv2151c/ftsQ:
(description and provenance of datasets)
Rv2151c/ftsQRv2813/-
Fe_supp_jason_reseq

0.36

0.747

low_pH_jason_reseq

-2.212

-0.43

NO_jason_reseq

-0.583

-1.735

B6_jason_reseq

-1.156

-0.733

MHCII_jason_reseq

-1.632

-0.396

Isoniazid02

0.0

0.054

Rifampicin4

-1.584

0.1

Ethambutol3

0.32

-0.474

Meropenem3

-0.701

-0.724

Vancomycin16

-1.186

0.292

Rv2680_day32

0.0

-0.423

H37Rv_KO_MarP

4.271

0.796

hypoxia_3wks

-1.049

-0.159

hypoxia_6wks

-1.483

-1.566

glycerol

-0.385

1.164

cholesterol

-0.276

0.835

AJ

-0.442

0.299

Bibs02

-0.348

-0.517

Bibs02c

-0.399

0.0

BL6

0.104

0.575

BL6a

-0.181

-0.422

BXD01

0.0

0.552

BXD010

0.0

-0.072

BXD011

1.029

0.63

BXD03

-0.123

0.998

BXD04

0.0

-0.305

BXD05

0.112

0.269

BXD06

0.0

0.438

BXD07

0.739

0.637

BXD08

0.111

0.139

BXD09

-0.268

0.81

CAST

-0.439

0.707

CCcont

2.227

0.997

DS01

0.71

0.725

DS02

-0.414

0.714

DS04

-0.37

0.474

DS0c

-0.413

0.058

GP01

-0.188

-1.378

GP02

0.0

-1.078

GP0c

-0.248

-1.263

NOD

-0.428

3.207

NZO

-0.38

0.487

PWK

-0.374

0.794

H37Rv_KO_CtpC

-0.309

0.169

H37Rv_KO_CtpD

-0.116

-0.85

H37Rv_KO_Rv1272

-0.269

-0.74

H37Rv_KO_SugABC

-0.189

0.152

H37Rv_KO_MbtN

-0.196

-1.242

Trans05

-0.249

-0.074

macrophage_unactivated

2.273

1.411

IL1

1.103

0.632

Rapamycin

1.706

1.145

Tcell

2.825

2.379

GMCSF

1.618

0.985

IFNab

0.707

0.81

IFNg

0.219

2.157

IFNg_GMCSF1

-0.88

0.842

Rv1432_day32

0.0

0.321

Rv1565c_day32

0.0

1.03

secA2_input

0.0

0.2

delta_Rv3594

-0.467

1.216

delta_Rv3717

0.317

0.938

delta_Rv3811

1.328

-0.269

delta_Rv0954

-1.383

0.207

PonA1

-0.799

1.027

EccD1_KO

-0.474

1.868

EspI_KO

0.374

1.218

PE35_KO

0.382

1.657

PPE68_KO

-1.552

2.326

glycerol2

1.77

2.058

lignocerate

2.39

2.828

oleate

0.0

-0.163

phosphatidylcholine

1.594

2.417

acetate

2.635

4.234

glucAc

1.481

3.129

Rv0950ko

0.513

-0.175

Rv1096ko

-0.582

1.056

Rv3684ko

-0.982

-0.806

delta_otsA_trehalose

-2.001

0.15