TnSeqCorr

Top 10 genes with highest correlation to Rv2151c/ftsQ:

update plotcorrelationlink to info on gene
Rv3780/- (cc=0.5777) info on Rv3780/-
Rv2758c/vapB21 (cc=0.5313) info on Rv2758c/vapB21
Rv0945/- (cc=0.4976) info on Rv0945/-
Rv0062/celA1 (cc=0.4848) info on Rv0062/celA1
Rv1805c/- (cc=0.4823) info on Rv1805c/-
Rv2237/- (cc=0.4812) info on Rv2237/-
Rv2813/- (cc=0.4802) info on Rv2813/-
Rv2887/- (cc=0.4762) info on Rv2887/-
Rv1237/sugB (cc=0.4589) info on Rv1237/sugB
Rv1888c/- (cc=0.4569) info on Rv1888c/-

Correlation of Rv2151c/ftsQ with Rv0062/celA1

Normalized LFCs for Rv2151c/ftsQ:
(description and provenance of datasets)
Rv2151c/ftsQRv0062/celA1
Fe_supp_jason_reseq

0.36

-0.707

low_pH_jason_reseq

-2.212

-0.795

NO_jason_reseq

-0.583

0.05

B6_jason_reseq

-1.156

-0.458

MHCII_jason_reseq

-1.632

-0.873

Isoniazid02

0.0

-0.236

Rifampicin4

-1.584

0.791

Ethambutol3

0.32

0.46

Meropenem3

-0.701

-1.385

Vancomycin16

-1.186

-0.602

Rv2680_day32

0.0

-0.151

H37Rv_KO_MarP

4.271

4.058

hypoxia_3wks

-1.049

-0.267

hypoxia_6wks

-1.483

-0.098

glycerol

-0.385

0.407

cholesterol

-0.276

0.238

AJ

-0.442

-0.452

Bibs02

-0.348

0.725

Bibs02c

-0.399

-0.111

BL6

0.104

0.628

BL6a

-0.181

0.235

BXD01

0.0

0.206

BXD010

0.0

0.349

BXD011

1.029

-0.248

BXD03

-0.123

0.169

BXD04

0.0

0.714

BXD05

0.112

-0.192

BXD06

0.0

-0.411

BXD07

0.739

0.05

BXD08

0.111

0.392

BXD09

-0.268

0.194

CAST

-0.439

-0.349

CCcont

2.227

0.592

DS01

0.71

0.643

DS02

-0.414

1.227

DS04

-0.37

1.706

DS0c

-0.413

0.49

GP01

-0.188

-0.534

GP02

0.0

0.137

GP0c

-0.248

-0.565

NOD

-0.428

-0.438

NZO

-0.38

-0.634

PWK

-0.374

-0.166

H37Rv_KO_CtpC

-0.309

0.161

H37Rv_KO_CtpD

-0.116

0.855

H37Rv_KO_Rv1272

-0.269

0.195

H37Rv_KO_SugABC

-0.189

0.432

H37Rv_KO_MbtN

-0.196

0.214

Trans05

-0.249

0.385

macrophage_unactivated

2.273

0.271

IL1

1.103

-0.303

Rapamycin

1.706

-0.249

Tcell

2.825

0.127

GMCSF

1.618

0.325

IFNab

0.707

0.148

IFNg

0.219

-0.989

IFNg_GMCSF1

-0.88

-0.126

Rv1432_day32

0.0

0.27

Rv1565c_day32

0.0

-0.246

secA2_input

0.0

-0.661

delta_Rv3594

-0.467

-1.103

delta_Rv3717

0.317

-0.593

delta_Rv3811

1.328

-1.191

delta_Rv0954

-1.383

-0.846

PonA1

-0.799

-0.563

EccD1_KO

-0.474

-0.582

EspI_KO

0.374

-0.887

PE35_KO

0.382

-0.49

PPE68_KO

-1.552

-0.819

glycerol2

1.77

0.544

lignocerate

2.39

0.708

oleate

0.0

0.061

phosphatidylcholine

1.594

0.588

acetate

2.635

0.575

glucAc

1.481

0.777

Rv0950ko

0.513

0.564

Rv1096ko

-0.582

0.154

Rv3684ko

-0.982

0.0

delta_otsA_trehalose

-2.001

-0.533