TnSeqCorr

Top 10 genes with highest correlation to Rv2151c/ftsQ:

update plotcorrelationlink to info on gene
Rv3780/- (cc=0.5777) info on Rv3780/-
Rv2758c/vapB21 (cc=0.5313) info on Rv2758c/vapB21
Rv0945/- (cc=0.4976) info on Rv0945/-
Rv0062/celA1 (cc=0.4848) info on Rv0062/celA1
Rv1805c/- (cc=0.4823) info on Rv1805c/-
Rv2237/- (cc=0.4812) info on Rv2237/-
Rv2813/- (cc=0.4802) info on Rv2813/-
Rv2887/- (cc=0.4762) info on Rv2887/-
Rv1237/sugB (cc=0.4589) info on Rv1237/sugB
Rv1888c/- (cc=0.4569) info on Rv1888c/-

Correlation of Rv2151c/ftsQ with Rv1888c/-

Normalized LFCs for Rv2151c/ftsQ:
(description and provenance of datasets)
Rv2151c/ftsQRv1888c/-
Fe_supp_jason_reseq

0.36

0.489

low_pH_jason_reseq

-2.212

-0.756

NO_jason_reseq

-0.583

0.016

B6_jason_reseq

-1.156

-0.92

MHCII_jason_reseq

-1.632

-0.144

Isoniazid02

0.0

-0.562

Rifampicin4

-1.584

-0.544

Ethambutol3

0.32

-0.328

Meropenem3

-0.701

-1.072

Vancomycin16

-1.186

-0.424

Rv2680_day32

0.0

0.996

H37Rv_KO_MarP

4.271

0.73

hypoxia_3wks

-1.049

-0.072

hypoxia_6wks

-1.483

-0.449

glycerol

-0.385

-0.884

cholesterol

-0.276

-0.623

AJ

-0.442

-0.583

Bibs02

-0.348

-0.31

Bibs02c

-0.399

-0.332

BL6

0.104

0.253

BL6a

-0.181

0.154

BXD01

0.0

0.154

BXD010

0.0

0.045

BXD011

1.029

0.482

BXD03

-0.123

-0.043

BXD04

0.0

0.039

BXD05

0.112

-0.067

BXD06

0.0

0.109

BXD07

0.739

0.186

BXD08

0.111

-0.171

BXD09

-0.268

0.221

CAST

-0.439

-0.769

CCcont

2.227

0.103

DS01

0.71

-0.351

DS02

-0.414

-0.181

DS04

-0.37

0.214

DS0c

-0.413

0.556

GP01

-0.188

0.31

GP02

0.0

1.113

GP0c

-0.248

0.133

NOD

-0.428

-0.133

NZO

-0.38

-0.691

PWK

-0.374

-0.271

H37Rv_KO_CtpC

-0.309

-0.105

H37Rv_KO_CtpD

-0.116

0.7

H37Rv_KO_Rv1272

-0.269

-0.471

H37Rv_KO_SugABC

-0.189

0.097

H37Rv_KO_MbtN

-0.196

0.31

Trans05

-0.249

-0.545

macrophage_unactivated

2.273

0.701

IL1

1.103

-0.294

Rapamycin

1.706

-0.285

Tcell

2.825

-0.098

GMCSF

1.618

-0.364

IFNab

0.707

-0.32

IFNg

0.219

-0.494

IFNg_GMCSF1

-0.88

-0.625

Rv1432_day32

0.0

0.532

Rv1565c_day32

0.0

-0.158

secA2_input

0.0

-0.269

delta_Rv3594

-0.467

-0.324

delta_Rv3717

0.317

-0.084

delta_Rv3811

1.328

-0.349

delta_Rv0954

-1.383

0.393

PonA1

-0.799

0.017

EccD1_KO

-0.474

-0.391

EspI_KO

0.374

-0.596

PE35_KO

0.382

-0.362

PPE68_KO

-1.552

-0.346

glycerol2

1.77

0.722

lignocerate

2.39

0.522

oleate

0.0

0.751

phosphatidylcholine

1.594

0.829

acetate

2.635

0.588

glucAc

1.481

0.241

Rv0950ko

0.513

0.473

Rv1096ko

-0.582

-0.232

Rv3684ko

-0.982

-0.252

delta_otsA_trehalose

-2.001

-1.003