TnSeqCorr

Top 10 genes with highest correlation to Rv2151c/ftsQ:

update plotcorrelationlink to info on gene
Rv3780/- (cc=0.5777) info on Rv3780/-
Rv2758c/vapB21 (cc=0.5313) info on Rv2758c/vapB21
Rv0945/- (cc=0.4976) info on Rv0945/-
Rv0062/celA1 (cc=0.4848) info on Rv0062/celA1
Rv1805c/- (cc=0.4823) info on Rv1805c/-
Rv2237/- (cc=0.4812) info on Rv2237/-
Rv2813/- (cc=0.4802) info on Rv2813/-
Rv2887/- (cc=0.4762) info on Rv2887/-
Rv1237/sugB (cc=0.4589) info on Rv1237/sugB
Rv1888c/- (cc=0.4569) info on Rv1888c/-

Correlation of Rv2151c/ftsQ with Rv0945/-

Normalized LFCs for Rv2151c/ftsQ:
(description and provenance of datasets)
Rv2151c/ftsQRv0945/-
Fe_supp_jason_reseq

0.36

-1.432

low_pH_jason_reseq

-2.212

0.216

NO_jason_reseq

-0.583

-1.769

B6_jason_reseq

-1.156

-2.038

MHCII_jason_reseq

-1.632

-0.851

Isoniazid02

0.0

-0.141

Rifampicin4

-1.584

-0.449

Ethambutol3

0.32

-0.479

Meropenem3

-0.701

-0.285

Vancomycin16

-1.186

0.318

Rv2680_day32

0.0

0.896

H37Rv_KO_MarP

4.271

0.265

hypoxia_3wks

-1.049

-2.333

hypoxia_6wks

-1.483

-1.979

glycerol

-0.385

2.127

cholesterol

-0.276

-0.647

AJ

-0.442

-0.881

Bibs02

-0.348

-1.592

Bibs02c

-0.399

-1.085

BL6

0.104

0.723

BL6a

-0.181

-0.626

BXD01

0.0

1.029

BXD010

0.0

-0.486

BXD011

1.029

-0.569

BXD03

-0.123

-0.92

BXD04

0.0

0.426

BXD05

0.112

-0.602

BXD06

0.0

0.059

BXD07

0.739

-0.064

BXD08

0.111

1.986

BXD09

-0.268

-0.36

CAST

-0.439

-1.373

CCcont

2.227

2.31

DS01

0.71

0.205

DS02

-0.414

0.364

DS04

-0.37

-0.613

DS0c

-0.413

-1.672

GP01

-0.188

1.651

GP02

0.0

-0.213

GP0c

-0.248

0.718

NOD

-0.428

-1.339

NZO

-0.38

-1.357

PWK

-0.374

-1.169

H37Rv_KO_CtpC

-0.309

2.408

H37Rv_KO_CtpD

-0.116

-0.976

H37Rv_KO_Rv1272

-0.269

0.778

H37Rv_KO_SugABC

-0.189

-0.376

H37Rv_KO_MbtN

-0.196

-0.614

Trans05

-0.249

0.611

macrophage_unactivated

2.273

2.326

IL1

1.103

-0.78

Rapamycin

1.706

-0.807

Tcell

2.825

2.63

GMCSF

1.618

-0.694

IFNab

0.707

0.0

IFNg

0.219

-0.703

IFNg_GMCSF1

-0.88

1.012

Rv1432_day32

0.0

0.0

Rv1565c_day32

0.0

0.0

secA2_input

0.0

-0.247

delta_Rv3594

-0.467

0.369

delta_Rv3717

0.317

-0.174

delta_Rv3811

1.328

0.805

delta_Rv0954

-1.383

1.455

PonA1

-0.799

0.212

EccD1_KO

-0.474

0.25

EspI_KO

0.374

1.777

PE35_KO

0.382

0.0

PPE68_KO

-1.552

0.586

glycerol2

1.77

3.113

lignocerate

2.39

3.78

oleate

0.0

-0.829

phosphatidylcholine

1.594

2.899

acetate

2.635

4.666

glucAc

1.481

3.978

Rv0950ko

0.513

-0.09

Rv1096ko

-0.582

0.0

Rv3684ko

-0.982

-0.96

delta_otsA_trehalose

-2.001

0.0