Top 10 genes with highest correlation to Rv2143/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3312c/- | (cc=0.5057) | info on Rv3312c/- |
| Rv2345/- | (cc=0.505) | info on Rv2345/- |
| Rv0342/iniA | (cc=0.4819) | info on Rv0342/iniA |
| Rv3109/moaA1 | (cc=0.4807) | info on Rv3109/moaA1 |
| Rv1997/ctpF | (cc=0.4637) | info on Rv1997/ctpF |
| Rv2313c/- | (cc=0.4537) | info on Rv2313c/- |
| Rv0754/PE_PGRS11 | (cc=0.4503) | info on Rv0754/PE_PGRS11 |
| Rv1882c/- | (cc=0.45) | info on Rv1882c/- |
| Rv2679/echA15 | (cc=0.444) | info on Rv2679/echA15 |
| Rv0830/- | (cc=0.4388) | info on Rv0830/- |
Correlation of Rv2143/- with Rv3109/moaA1
Normalized LFCs for Rv2143/-:
(description and provenance of datasets)
| Rv2143/- | Rv3109/moaA1 | |
| Fe_supp_jason_reseq | -0.313 | 0.579 |
| low_pH_jason_reseq | -1.011 | -1.109 |
| NO_jason_reseq | 0.087 | -0.651 |
| B6_jason_reseq | 0.05 | 0.082 |
| MHCII_jason_reseq | 0.391 | 0.841 |
| Isoniazid02 | -1.005 | -1.881 |
| Rifampicin4 | 1.088 | 0.523 |
| Ethambutol3 | -0.967 | -1.529 |
| Meropenem3 | -0.571 | -1.345 |
| Vancomycin16 | -0.493 | -0.456 |
| Rv2680_day32 | -0.412 | 0.174 |
| H37Rv_KO_MarP | -0.238 | -0.648 |
| hypoxia_3wks | 0.79 | 0.163 |
| hypoxia_6wks | 0.589 | -0.088 |
| glycerol | -0.392 | 0.0 |
| cholesterol | 0.062 | -0.674 |
| AJ | 0.476 | 0.834 |
| Bibs02 | -0.056 | -0.319 |
| Bibs02c | -0.623 | -0.365 |
| BL6 | -0.092 | -0.69 |
| BL6a | -0.412 | -0.613 |
| BXD01 | -0.186 | -0.147 |
| BXD010 | -0.791 | -0.352 |
| BXD011 | -0.21 | 0.0 |
| BXD03 | -0.764 | -0.943 |
| BXD04 | -0.476 | 0.556 |
| BXD05 | -0.386 | 0.17 |
| BXD06 | -0.452 | -0.073 |
| BXD07 | -0.315 | -0.702 |
| BXD08 | -0.317 | 0.289 |
| BXD09 | -0.273 | -0.654 |
| CAST | -0.063 | 0.062 |
| CCcont | -0.586 | -0.633 |
| DS01 | -0.222 | -0.267 |
| DS02 | -0.518 | -0.837 |
| DS04 | -0.218 | 0.697 |
| DS0c | -0.622 | -0.919 |
| GP01 | -0.396 | 0.335 |
| GP02 | 0.207 | 0.765 |
| GP0c | -0.392 | 0.035 |
| NOD | 0.535 | -0.617 |
| NZO | 0.633 | 0.559 |
| PWK | 0.298 | -0.281 |
| H37Rv_KO_CtpC | 0.232 | 0.242 |
| H37Rv_KO_CtpD | -0.373 | 1.273 |
| H37Rv_KO_Rv1272 | 0.728 | 1.166 |
| H37Rv_KO_SugABC | 0.223 | 0.171 |
| H37Rv_KO_MbtN | 0.006 | 0.534 |
| Trans05 | 0.309 | 1.08 |
| macrophage_unactivated | -0.044 | -0.363 |
| IL1 | 0.19 | -1.818 |
| Rapamycin | 0.276 | -0.945 |
| Tcell | 0.091 | -0.186 |
| GMCSF | 0.385 | -1.001 |
| IFNab | -0.085 | -1.37 |
| IFNg | 0.037 | -1.419 |
| IFNg_GMCSF1 | 0.311 | -0.361 |
| Rv1432_day32 | 0.795 | -0.231 |
| Rv1565c_day32 | 0.396 | 0.952 |
| secA2_input | -0.531 | 0.377 |
| delta_Rv3594 | -0.011 | -0.58 |
| delta_Rv3717 | 0.123 | -0.826 |
| delta_Rv3811 | -0.457 | -0.849 |
| delta_Rv0954 | -0.074 | -0.311 |
| PonA1 | -1.13 | -1.287 |
| EccD1_KO | 0.257 | 0.49 |
| EspI_KO | -0.011 | -1.124 |
| PE35_KO | -0.79 | -1.033 |
| PPE68_KO | -0.806 | -0.419 |
| glycerol2 | 0.188 | 0.395 |
| lignocerate | 0.265 | 0.0 |
| oleate | 0.644 | 0.259 |
| phosphatidylcholine | 0.455 | 0.483 |
| acetate | -0.224 | 0.0 |
| glucAc | -0.308 | -0.216 |
| Rv0950ko | 0.103 | 0.537 |
| Rv1096ko | -0.841 | -0.748 |
| Rv3684ko | -0.337 | 0.242 |
| delta_otsA_trehalose | 1.355 | 1.166 |