Top 10 genes with highest correlation to Rv2143/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3312c/- | (cc=0.5057) | info on Rv3312c/- |
| Rv2345/- | (cc=0.505) | info on Rv2345/- |
| Rv0342/iniA | (cc=0.4819) | info on Rv0342/iniA |
| Rv3109/moaA1 | (cc=0.4807) | info on Rv3109/moaA1 |
| Rv1997/ctpF | (cc=0.4637) | info on Rv1997/ctpF |
| Rv2313c/- | (cc=0.4537) | info on Rv2313c/- |
| Rv0754/PE_PGRS11 | (cc=0.4503) | info on Rv0754/PE_PGRS11 |
| Rv1882c/- | (cc=0.45) | info on Rv1882c/- |
| Rv2679/echA15 | (cc=0.444) | info on Rv2679/echA15 |
| Rv0830/- | (cc=0.4388) | info on Rv0830/- |
Correlation of Rv2143/- with Rv0342/iniA
Normalized LFCs for Rv2143/-:
(description and provenance of datasets)
| Rv2143/- | Rv0342/iniA | |
| Fe_supp_jason_reseq | -0.313 | -0.583 |
| low_pH_jason_reseq | -1.011 | -0.781 |
| NO_jason_reseq | 0.087 | 0.795 |
| B6_jason_reseq | 0.05 | 0.252 |
| MHCII_jason_reseq | 0.391 | 0.5 |
| Isoniazid02 | -1.005 | -2.219 |
| Rifampicin4 | 1.088 | 0.33 |
| Ethambutol3 | -0.967 | -2.382 |
| Meropenem3 | -0.571 | -1.242 |
| Vancomycin16 | -0.493 | -0.7 |
| Rv2680_day32 | -0.412 | -0.18 |
| H37Rv_KO_MarP | -0.238 | 0.368 |
| hypoxia_3wks | 0.79 | -0.112 |
| hypoxia_6wks | 0.589 | -0.535 |
| glycerol | -0.392 | 0.532 |
| cholesterol | 0.062 | 0.446 |
| AJ | 0.476 | 0.765 |
| Bibs02 | -0.056 | 0.009 |
| Bibs02c | -0.623 | -0.656 |
| BL6 | -0.092 | -0.238 |
| BL6a | -0.412 | -0.331 |
| BXD01 | -0.186 | -0.119 |
| BXD010 | -0.791 | -0.076 |
| BXD011 | -0.21 | 0.106 |
| BXD03 | -0.764 | 0.207 |
| BXD04 | -0.476 | 0.058 |
| BXD05 | -0.386 | 0.414 |
| BXD06 | -0.452 | 0.387 |
| BXD07 | -0.315 | -0.097 |
| BXD08 | -0.317 | 0.05 |
| BXD09 | -0.273 | -0.062 |
| CAST | -0.063 | 0.322 |
| CCcont | -0.586 | -0.276 |
| DS01 | -0.222 | -0.477 |
| DS02 | -0.518 | 0.221 |
| DS04 | -0.218 | -0.646 |
| DS0c | -0.622 | 0.489 |
| GP01 | -0.396 | 0.527 |
| GP02 | 0.207 | 0.28 |
| GP0c | -0.392 | 0.068 |
| NOD | 0.535 | 0.042 |
| NZO | 0.633 | 0.549 |
| PWK | 0.298 | 0.517 |
| H37Rv_KO_CtpC | 0.232 | 0.207 |
| H37Rv_KO_CtpD | -0.373 | -0.05 |
| H37Rv_KO_Rv1272 | 0.728 | 0.588 |
| H37Rv_KO_SugABC | 0.223 | 0.512 |
| H37Rv_KO_MbtN | 0.006 | 0.24 |
| Trans05 | 0.309 | 0.793 |
| macrophage_unactivated | -0.044 | -0.429 |
| IL1 | 0.19 | -0.35 |
| Rapamycin | 0.276 | 0.147 |
| Tcell | 0.091 | -0.081 |
| GMCSF | 0.385 | -0.312 |
| IFNab | -0.085 | 0.239 |
| IFNg | 0.037 | -0.155 |
| IFNg_GMCSF1 | 0.311 | 0.176 |
| Rv1432_day32 | 0.795 | 0.186 |
| Rv1565c_day32 | 0.396 | 0.39 |
| secA2_input | -0.531 | 0.564 |
| delta_Rv3594 | -0.011 | -0.509 |
| delta_Rv3717 | 0.123 | -0.352 |
| delta_Rv3811 | -0.457 | -0.495 |
| delta_Rv0954 | -0.074 | -0.351 |
| PonA1 | -1.13 | -0.163 |
| EccD1_KO | 0.257 | 0.023 |
| EspI_KO | -0.011 | -0.522 |
| PE35_KO | -0.79 | -0.292 |
| PPE68_KO | -0.806 | -0.659 |
| glycerol2 | 0.188 | 0.423 |
| lignocerate | 0.265 | 0.66 |
| oleate | 0.644 | 0.461 |
| phosphatidylcholine | 0.455 | 0.391 |
| acetate | -0.224 | 0.632 |
| glucAc | -0.308 | 0.381 |
| Rv0950ko | 0.103 | 0.286 |
| Rv1096ko | -0.841 | 0.531 |
| Rv3684ko | -0.337 | 0.311 |
| delta_otsA_trehalose | 1.355 | 1.165 |