Top 10 genes with highest correlation to Rv2131c/cysQ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0211/pckA | (cc=0.8433) | info on Rv0211/pckA |
| Rv0238/- | (cc=0.7516) | info on Rv0238/- |
| Rv1078/pra | (cc=0.7118) | info on Rv1078/pra |
| Rv1339/- | (cc=0.6989) | info on Rv1339/- |
| Rv1780/- | (cc=0.6965) | info on Rv1780/- |
| Rv0642c/mmaA4 | (cc=0.6858) | info on Rv0642c/mmaA4 |
| Rv2134c/- | (cc=0.6678) | info on Rv2134c/- |
| Rv0502/- | (cc=0.6451) | info on Rv0502/- |
| Rv0153c/ptbB | (cc=0.6334) | info on Rv0153c/ptbB |
| Rv2569c/- | (cc=0.6274) | info on Rv2569c/- |
Correlation of Rv2131c/cysQ with Rv2569c/-
Normalized LFCs for Rv2131c/cysQ:
(description and provenance of datasets)
| Rv2131c/cysQ | Rv2569c/- | |
| Fe_supp_jason_reseq | -1.579 | -0.766 |
| low_pH_jason_reseq | 2.441 | 4.047 |
| NO_jason_reseq | -2.042 | 0.189 |
| B6_jason_reseq | -1.402 | -0.428 |
| MHCII_jason_reseq | -0.977 | -1.818 |
| Isoniazid02 | 4.744 | 1.48 |
| Rifampicin4 | 0.29 | 1.362 |
| Ethambutol3 | 0.777 | 0.34 |
| Meropenem3 | -0.497 | -0.219 |
| Vancomycin16 | -1.303 | 0.22 |
| Rv2680_day32 | 0.0 | 1.68 |
| H37Rv_KO_MarP | 1.3 | -1.442 |
| hypoxia_3wks | 1.184 | 0.913 |
| hypoxia_6wks | 2.414 | 1.817 |
| glycerol | 0.0 | 1.758 |
| cholesterol | 0.0 | -0.469 |
| AJ | 0.0 | -0.168 |
| Bibs02 | 0.0 | -0.592 |
| Bibs02c | 0.0 | -0.074 |
| BL6 | 2.634 | 1.376 |
| BL6a | 2.709 | 1.291 |
| BXD01 | 3.093 | 1.652 |
| BXD010 | 2.525 | 1.471 |
| BXD011 | 2.032 | 1.184 |
| BXD03 | 0.75 | 1.115 |
| BXD04 | 1.582 | 1.702 |
| BXD05 | 2.051 | 1.344 |
| BXD06 | 2.793 | 2.282 |
| BXD07 | 3.258 | 0.877 |
| BXD08 | 1.781 | 2.006 |
| BXD09 | 3.789 | 1.306 |
| CAST | 0.0 | 0.0 |
| CCcont | 4.141 | 2.716 |
| DS01 | 0.0 | 0.0 |
| DS02 | 0.0 | 0.0 |
| DS04 | 2.358 | 0.533 |
| DS0c | 0.0 | -0.157 |
| GP01 | 0.0 | 1.855 |
| GP02 | 0.159 | 0.672 |
| GP0c | 0.0 | 1.333 |
| NOD | 0.0 | -0.727 |
| NZO | 0.0 | -0.22 |
| PWK | 0.0 | 0.0 |
| H37Rv_KO_CtpC | 0.901 | -0.379 |
| H37Rv_KO_CtpD | 0.241 | 1.044 |
| H37Rv_KO_Rv1272 | 1.714 | 0.048 |
| H37Rv_KO_SugABC | 2.572 | 1.215 |
| H37Rv_KO_MbtN | 1.712 | 1.726 |
| Trans05 | 1.251 | 1.644 |
| macrophage_unactivated | -1.146 | 0.467 |
| IL1 | -2.515 | -0.756 |
| Rapamycin | -1.439 | -0.641 |
| Tcell | -3.812 | 0.707 |
| GMCSF | -1.545 | 0.483 |
| IFNab | 2.576 | 0.553 |
| IFNg | -2.673 | -1.216 |
| IFNg_GMCSF1 | -1.838 | -1.43 |
| Rv1432_day32 | 0.0 | 0.505 |
| Rv1565c_day32 | 0.0 | -1.579 |
| secA2_input | 0.523 | -1.126 |
| delta_Rv3594 | 4.569 | -0.733 |
| delta_Rv3717 | 3.925 | 0.554 |
| delta_Rv3811 | 4.714 | -0.657 |
| delta_Rv0954 | -0.69 | -0.89 |
| PonA1 | -1.32 | -1.139 |
| EccD1_KO | -5.903 | -2.394 |
| EspI_KO | -6.0 | -1.84 |
| PE35_KO | -3.063 | -1.173 |
| PPE68_KO | -4.348 | -1.286 |
| glycerol2 | -0.744 | -1.868 |
| lignocerate | -1.218 | -0.621 |
| oleate | -1.955 | -0.396 |
| phosphatidylcholine | -1.931 | -1.238 |
| acetate | 0.422 | 0.387 |
| glucAc | -0.249 | -0.082 |
| Rv0950ko | -5.992 | -1.101 |
| Rv1096ko | -6.0 | -1.101 |
| Rv3684ko | -6.0 | -1.461 |
| delta_otsA_trehalose | -1.39 | -0.034 |