Top 10 genes with highest correlation to Rv2131c/cysQ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0211/pckA | (cc=0.8433) | info on Rv0211/pckA |
| Rv0238/- | (cc=0.7516) | info on Rv0238/- |
| Rv1078/pra | (cc=0.7118) | info on Rv1078/pra |
| Rv1339/- | (cc=0.6989) | info on Rv1339/- |
| Rv1780/- | (cc=0.6965) | info on Rv1780/- |
| Rv0642c/mmaA4 | (cc=0.6858) | info on Rv0642c/mmaA4 |
| Rv2134c/- | (cc=0.6678) | info on Rv2134c/- |
| Rv0502/- | (cc=0.6451) | info on Rv0502/- |
| Rv0153c/ptbB | (cc=0.6334) | info on Rv0153c/ptbB |
| Rv2569c/- | (cc=0.6274) | info on Rv2569c/- |
Correlation of Rv2131c/cysQ with Rv0642c/mmaA4
Normalized LFCs for Rv2131c/cysQ:
(description and provenance of datasets)
| Rv2131c/cysQ | Rv0642c/mmaA4 | |
| Fe_supp_jason_reseq | -1.579 | 1.547 |
| low_pH_jason_reseq | 2.441 | 2.202 |
| NO_jason_reseq | -2.042 | 2.678 |
| B6_jason_reseq | -1.402 | -2.886 |
| MHCII_jason_reseq | -0.977 | -1.687 |
| Isoniazid02 | 4.744 | -1.333 |
| Rifampicin4 | 0.29 | -1.565 |
| Ethambutol3 | 0.777 | -2.112 |
| Meropenem3 | -0.497 | -1.815 |
| Vancomycin16 | -1.303 | -6.0 |
| Rv2680_day32 | 0.0 | -0.359 |
| H37Rv_KO_MarP | 1.3 | 0.571 |
| hypoxia_3wks | 1.184 | -0.937 |
| hypoxia_6wks | 2.414 | 3.548 |
| glycerol | 0.0 | 1.556 |
| cholesterol | 0.0 | -0.145 |
| AJ | 0.0 | 0.585 |
| Bibs02 | 0.0 | 0.717 |
| Bibs02c | 0.0 | 2.877 |
| BL6 | 2.634 | 2.544 |
| BL6a | 2.709 | 3.946 |
| BXD01 | 3.093 | 4.224 |
| BXD010 | 2.525 | 4.186 |
| BXD011 | 2.032 | 6.0 |
| BXD03 | 0.75 | 4.026 |
| BXD04 | 1.582 | 3.598 |
| BXD05 | 2.051 | 4.7 |
| BXD06 | 2.793 | 5.627 |
| BXD07 | 3.258 | 4.784 |
| BXD08 | 1.781 | 5.896 |
| BXD09 | 3.789 | 4.223 |
| CAST | 0.0 | -0.23 |
| CCcont | 4.141 | 5.608 |
| DS01 | 0.0 | -0.236 |
| DS02 | 0.0 | -0.217 |
| DS04 | 2.358 | 2.617 |
| DS0c | 0.0 | -0.217 |
| GP01 | 0.0 | 6.0 |
| GP02 | 0.159 | 3.274 |
| GP0c | 0.0 | 6.0 |
| NOD | 0.0 | 0.0 |
| NZO | 0.0 | -0.199 |
| PWK | 0.0 | 0.342 |
| H37Rv_KO_CtpC | 0.901 | 4.153 |
| H37Rv_KO_CtpD | 0.241 | 1.805 |
| H37Rv_KO_Rv1272 | 1.714 | 4.035 |
| H37Rv_KO_SugABC | 2.572 | 1.362 |
| H37Rv_KO_MbtN | 1.712 | 6.0 |
| Trans05 | 1.251 | 4.713 |
| macrophage_unactivated | -1.146 | -3.595 |
| IL1 | -2.515 | 0.297 |
| Rapamycin | -1.439 | -0.706 |
| Tcell | -3.812 | -0.124 |
| GMCSF | -1.545 | -3.126 |
| IFNab | 2.576 | -0.883 |
| IFNg | -2.673 | -4.153 |
| IFNg_GMCSF1 | -1.838 | -5.477 |
| Rv1432_day32 | 0.0 | -0.98 |
| Rv1565c_day32 | 0.0 | -1.21 |
| secA2_input | 0.523 | 0.424 |
| delta_Rv3594 | 4.569 | 1.768 |
| delta_Rv3717 | 3.925 | 3.284 |
| delta_Rv3811 | 4.714 | 1.646 |
| delta_Rv0954 | -0.69 | -2.158 |
| PonA1 | -1.32 | -6.0 |
| EccD1_KO | -5.903 | -6.0 |
| EspI_KO | -6.0 | -6.0 |
| PE35_KO | -3.063 | -6.0 |
| PPE68_KO | -4.348 | -6.0 |
| glycerol2 | -0.744 | -1.684 |
| lignocerate | -1.218 | -1.464 |
| oleate | -1.955 | -1.167 |
| phosphatidylcholine | -1.931 | -1.683 |
| acetate | 0.422 | -1.561 |
| glucAc | -0.249 | -0.451 |
| Rv0950ko | -5.992 | -3.98 |
| Rv1096ko | -6.0 | -3.906 |
| Rv3684ko | -6.0 | -1.628 |
| delta_otsA_trehalose | -1.39 | -0.595 |