Top 10 genes with highest correlation to Rv2131c/cysQ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0211/pckA | (cc=0.8433) | info on Rv0211/pckA |
| Rv0238/- | (cc=0.7516) | info on Rv0238/- |
| Rv1078/pra | (cc=0.7118) | info on Rv1078/pra |
| Rv1339/- | (cc=0.6989) | info on Rv1339/- |
| Rv1780/- | (cc=0.6965) | info on Rv1780/- |
| Rv0642c/mmaA4 | (cc=0.6858) | info on Rv0642c/mmaA4 |
| Rv2134c/- | (cc=0.6678) | info on Rv2134c/- |
| Rv0502/- | (cc=0.6451) | info on Rv0502/- |
| Rv0153c/ptbB | (cc=0.6334) | info on Rv0153c/ptbB |
| Rv2569c/- | (cc=0.6274) | info on Rv2569c/- |
Correlation of Rv2131c/cysQ with Rv0238/-
Normalized LFCs for Rv2131c/cysQ:
(description and provenance of datasets)
| Rv2131c/cysQ | Rv0238/- | |
| Fe_supp_jason_reseq | -1.579 | -0.583 |
| low_pH_jason_reseq | 2.441 | -1.919 |
| NO_jason_reseq | -2.042 | -2.058 |
| B6_jason_reseq | -1.402 | -1.519 |
| MHCII_jason_reseq | -0.977 | -1.595 |
| Isoniazid02 | 4.744 | -0.796 |
| Rifampicin4 | 0.29 | -0.211 |
| Ethambutol3 | 0.777 | 1.17 |
| Meropenem3 | -0.497 | 1.411 |
| Vancomycin16 | -1.303 | 0.562 |
| Rv2680_day32 | 0.0 | 0.131 |
| H37Rv_KO_MarP | 1.3 | 1.25 |
| hypoxia_3wks | 1.184 | 2.125 |
| hypoxia_6wks | 2.414 | 1.831 |
| glycerol | 0.0 | 1.549 |
| cholesterol | 0.0 | 1.17 |
| AJ | 0.0 | -0.442 |
| Bibs02 | 0.0 | -0.348 |
| Bibs02c | 0.0 | -0.191 |
| BL6 | 2.634 | -0.238 |
| BL6a | 2.709 | 0.595 |
| BXD01 | 3.093 | 0.0 |
| BXD010 | 2.525 | 1.769 |
| BXD011 | 2.032 | 2.186 |
| BXD03 | 0.75 | 0.0 |
| BXD04 | 1.582 | 0.594 |
| BXD05 | 2.051 | 1.827 |
| BXD06 | 2.793 | 0.401 |
| BXD07 | 3.258 | 0.115 |
| BXD08 | 1.781 | 0.111 |
| BXD09 | 3.789 | 2.036 |
| CAST | 0.0 | -0.21 |
| CCcont | 4.141 | 3.213 |
| DS01 | 0.0 | -0.45 |
| DS02 | 0.0 | -0.414 |
| DS04 | 2.358 | 1.989 |
| DS0c | 0.0 | -0.413 |
| GP01 | 0.0 | -0.188 |
| GP02 | 0.159 | -0.159 |
| GP0c | 0.0 | -0.248 |
| NOD | 0.0 | 0.0 |
| NZO | 0.0 | -0.38 |
| PWK | 0.0 | -0.374 |
| H37Rv_KO_CtpC | 0.901 | 0.0 |
| H37Rv_KO_CtpD | 0.241 | -0.116 |
| H37Rv_KO_Rv1272 | 1.714 | -0.129 |
| H37Rv_KO_SugABC | 2.572 | 1.165 |
| H37Rv_KO_MbtN | 1.712 | 3.167 |
| Trans05 | 1.251 | 0.305 |
| macrophage_unactivated | -1.146 | -1.016 |
| IL1 | -2.515 | -0.955 |
| Rapamycin | -1.439 | 0.068 |
| Tcell | -3.812 | -1.235 |
| GMCSF | -1.545 | -3.958 |
| IFNab | 2.576 | 0.738 |
| IFNg | -2.673 | -3.247 |
| IFNg_GMCSF1 | -1.838 | -4.71 |
| Rv1432_day32 | 0.0 | 0.18 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | 0.523 | -1.565 |
| delta_Rv3594 | 4.569 | 3.099 |
| delta_Rv3717 | 3.925 | 3.619 |
| delta_Rv3811 | 4.714 | 3.289 |
| delta_Rv0954 | -0.69 | -2.003 |
| PonA1 | -1.32 | -2.35 |
| EccD1_KO | -5.903 | -6.0 |
| EspI_KO | -6.0 | -6.0 |
| PE35_KO | -3.063 | -3.856 |
| PPE68_KO | -4.348 | -3.663 |
| glycerol2 | -0.744 | -3.747 |
| lignocerate | -1.218 | -1.501 |
| oleate | -1.955 | 4.347 |
| phosphatidylcholine | -1.931 | -3.947 |
| acetate | 0.422 | -0.54 |
| glucAc | -0.249 | -0.215 |
| Rv0950ko | -5.992 | -6.0 |
| Rv1096ko | -6.0 | -5.54 |
| Rv3684ko | -6.0 | -2.911 |
| delta_otsA_trehalose | -1.39 | 1.902 |