Top 10 genes with highest correlation to Rv2063A/mazF7:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1843c/guaB1 | (cc=0.6178) | info on Rv1843c/guaB1 |
| Rv0846c/- | (cc=0.5895) | info on Rv0846c/- |
| Rv2636/- | (cc=0.5764) | info on Rv2636/- |
| Rv3367/PE_PGRS51 | (cc=0.5739) | info on Rv3367/PE_PGRS51 |
| Rv3401/- | (cc=0.562) | info on Rv3401/- |
| Rv1815/- | (cc=0.5496) | info on Rv1815/- |
| Rv1834/lipZ | (cc=0.5484) | info on Rv1834/lipZ |
| Rv3532/PPE61 | (cc=0.5374) | info on Rv3532/PPE61 |
| Rv2687c/- | (cc=0.5313) | info on Rv2687c/- |
| Rv2340c/PE_PGRS39 | (cc=0.5297) | info on Rv2340c/PE_PGRS39 |
Correlation of Rv2063A/mazF7 with Rv3401/-
Normalized LFCs for Rv2063A/mazF7:
(description and provenance of datasets)
| Rv2063A/mazF7 | Rv3401/- | |
| Fe_supp_jason_reseq | -0.63 | 0.0 |
| low_pH_jason_reseq | -1.272 | -0.659 |
| NO_jason_reseq | 0.706 | -0.026 |
| B6_jason_reseq | 1.121 | 0.695 |
| MHCII_jason_reseq | 1.353 | 0.952 |
| Isoniazid02 | 1.021 | 0.383 |
| Rifampicin4 | 0.181 | 0.244 |
| Ethambutol3 | 0.586 | 0.72 |
| Meropenem3 | 0.763 | 1.518 |
| Vancomycin16 | 0.743 | -0.082 |
| Rv2680_day32 | 0.594 | 1.336 |
| H37Rv_KO_MarP | 0.323 | 0.23 |
| hypoxia_3wks | 0.443 | -0.068 |
| hypoxia_6wks | -0.148 | -0.035 |
| glycerol | -0.031 | -0.053 |
| cholesterol | 0.237 | 1.523 |
| AJ | 0.869 | -0.131 |
| Bibs02 | 0.736 | 0.567 |
| Bibs02c | 0.897 | -0.156 |
| BL6 | 0.072 | -0.906 |
| BL6a | 0.023 | -0.97 |
| BXD01 | -1.052 | -0.89 |
| BXD010 | -1.219 | -0.854 |
| BXD011 | -1.222 | -0.556 |
| BXD03 | -0.161 | -0.564 |
| BXD04 | -2.091 | -0.606 |
| BXD05 | -0.061 | -0.793 |
| BXD06 | -1.529 | -1.097 |
| BXD07 | -1.083 | -0.687 |
| BXD08 | -0.626 | -0.624 |
| BXD09 | -1.238 | -0.892 |
| CAST | 0.647 | 0.269 |
| CCcont | -1.346 | -1.095 |
| DS01 | 0.37 | 0.548 |
| DS02 | 0.227 | 0.421 |
| DS04 | -0.441 | 0.602 |
| DS0c | -0.085 | 0.404 |
| GP01 | -1.251 | 0.349 |
| GP02 | 0.488 | 0.307 |
| GP0c | -0.325 | -0.109 |
| NOD | -0.172 | 0.906 |
| NZO | 0.029 | -0.205 |
| PWK | 0.226 | -0.354 |
| H37Rv_KO_CtpC | -0.772 | -0.54 |
| H37Rv_KO_CtpD | 0.756 | 0.537 |
| H37Rv_KO_Rv1272 | -1.001 | -0.305 |
| H37Rv_KO_SugABC | -0.395 | -0.478 |
| H37Rv_KO_MbtN | 0.0 | -0.036 |
| Trans05 | 0.319 | 0.384 |
| macrophage_unactivated | -2.03 | -0.925 |
| IL1 | -0.991 | -0.97 |
| Rapamycin | -0.758 | -0.829 |
| Tcell | -1.3 | -0.671 |
| GMCSF | -0.055 | -0.57 |
| IFNab | -0.747 | -1.022 |
| IFNg | -1.245 | -0.123 |
| IFNg_GMCSF1 | -1.684 | 0.251 |
| Rv1432_day32 | 2.451 | 0.757 |
| Rv1565c_day32 | 0.389 | 0.763 |
| secA2_input | 0.244 | 0.261 |
| delta_Rv3594 | -1.187 | -0.223 |
| delta_Rv3717 | 0.122 | -0.227 |
| delta_Rv3811 | -0.877 | -0.235 |
| delta_Rv0954 | -0.359 | 0.088 |
| PonA1 | 0.259 | 0.323 |
| EccD1_KO | 0.536 | -0.033 |
| EspI_KO | 0.371 | -0.086 |
| PE35_KO | 0.018 | -0.146 |
| PPE68_KO | -0.921 | -0.16 |
| glycerol2 | -0.597 | 0.083 |
| lignocerate | 0.039 | -0.571 |
| oleate | 0.189 | -0.647 |
| phosphatidylcholine | 0.176 | -0.13 |
| acetate | 0.183 | -0.191 |
| glucAc | 0.312 | -0.389 |
| Rv0950ko | 0.066 | 0.093 |
| Rv1096ko | -0.296 | 0.184 |
| Rv3684ko | -2.974 | -0.105 |
| delta_otsA_trehalose | 1.896 | 0.465 |