Top 10 genes with highest correlation to Rv2063A/mazF7:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1843c/guaB1 | (cc=0.6178) | info on Rv1843c/guaB1 |
| Rv0846c/- | (cc=0.5895) | info on Rv0846c/- |
| Rv2636/- | (cc=0.5764) | info on Rv2636/- |
| Rv3367/PE_PGRS51 | (cc=0.5739) | info on Rv3367/PE_PGRS51 |
| Rv3401/- | (cc=0.562) | info on Rv3401/- |
| Rv1815/- | (cc=0.5496) | info on Rv1815/- |
| Rv1834/lipZ | (cc=0.5484) | info on Rv1834/lipZ |
| Rv3532/PPE61 | (cc=0.5374) | info on Rv3532/PPE61 |
| Rv2687c/- | (cc=0.5313) | info on Rv2687c/- |
| Rv2340c/PE_PGRS39 | (cc=0.5297) | info on Rv2340c/PE_PGRS39 |
Correlation of Rv2063A/mazF7 with Rv1815/-
Normalized LFCs for Rv2063A/mazF7:
(description and provenance of datasets)
| Rv2063A/mazF7 | Rv1815/- | |
| Fe_supp_jason_reseq | -0.63 | 1.187 |
| low_pH_jason_reseq | -1.272 | -0.681 |
| NO_jason_reseq | 0.706 | -0.895 |
| B6_jason_reseq | 1.121 | 0.908 |
| MHCII_jason_reseq | 1.353 | 2.027 |
| Isoniazid02 | 1.021 | 0.473 |
| Rifampicin4 | 0.181 | -0.885 |
| Ethambutol3 | 0.586 | 0.722 |
| Meropenem3 | 0.763 | -0.37 |
| Vancomycin16 | 0.743 | -1.114 |
| Rv2680_day32 | 0.594 | -0.86 |
| H37Rv_KO_MarP | 0.323 | 0.382 |
| hypoxia_3wks | 0.443 | -0.77 |
| hypoxia_6wks | -0.148 | -0.025 |
| glycerol | -0.031 | -0.632 |
| cholesterol | 0.237 | -0.294 |
| AJ | 0.869 | 0.37 |
| Bibs02 | 0.736 | 1.209 |
| Bibs02c | 0.897 | 1.228 |
| BL6 | 0.072 | -0.351 |
| BL6a | 0.023 | 0.495 |
| BXD01 | -1.052 | -1.049 |
| BXD010 | -1.219 | -1.936 |
| BXD011 | -1.222 | -1.246 |
| BXD03 | -0.161 | -0.695 |
| BXD04 | -2.091 | -1.959 |
| BXD05 | -0.061 | -1.901 |
| BXD06 | -1.529 | -1.292 |
| BXD07 | -1.083 | -1.714 |
| BXD08 | -0.626 | -0.991 |
| BXD09 | -1.238 | -1.12 |
| CAST | 0.647 | -1.183 |
| CCcont | -1.346 | -1.051 |
| DS01 | 0.37 | 0.546 |
| DS02 | 0.227 | -0.43 |
| DS04 | -0.441 | 0.063 |
| DS0c | -0.085 | 1.105 |
| GP01 | -1.251 | -0.849 |
| GP02 | 0.488 | -0.685 |
| GP0c | -0.325 | -0.739 |
| NOD | -0.172 | 0.482 |
| NZO | 0.029 | -0.243 |
| PWK | 0.226 | -0.065 |
| H37Rv_KO_CtpC | -0.772 | -1.624 |
| H37Rv_KO_CtpD | 0.756 | 0.743 |
| H37Rv_KO_Rv1272 | -1.001 | -0.433 |
| H37Rv_KO_SugABC | -0.395 | 0.02 |
| H37Rv_KO_MbtN | 0.0 | -0.848 |
| Trans05 | 0.319 | 0.409 |
| macrophage_unactivated | -2.03 | -2.778 |
| IL1 | -0.991 | -0.97 |
| Rapamycin | -0.758 | -1.7 |
| Tcell | -1.3 | -2.623 |
| GMCSF | -0.055 | -0.76 |
| IFNab | -0.747 | -2.113 |
| IFNg | -1.245 | -0.444 |
| IFNg_GMCSF1 | -1.684 | -0.672 |
| Rv1432_day32 | 2.451 | -0.289 |
| Rv1565c_day32 | 0.389 | 1.071 |
| secA2_input | 0.244 | -0.305 |
| delta_Rv3594 | -1.187 | -0.092 |
| delta_Rv3717 | 0.122 | 0.584 |
| delta_Rv3811 | -0.877 | 0.22 |
| delta_Rv0954 | -0.359 | 0.057 |
| PonA1 | 0.259 | -0.471 |
| EccD1_KO | 0.536 | -0.97 |
| EspI_KO | 0.371 | -0.399 |
| PE35_KO | 0.018 | 0.19 |
| PPE68_KO | -0.921 | 0.058 |
| glycerol2 | -0.597 | -1.047 |
| lignocerate | 0.039 | -0.585 |
| oleate | 0.189 | -1.093 |
| phosphatidylcholine | 0.176 | -1.08 |
| acetate | 0.183 | 0.339 |
| glucAc | 0.312 | -0.016 |
| Rv0950ko | 0.066 | 0.103 |
| Rv1096ko | -0.296 | -1.224 |
| Rv3684ko | -2.974 | -1.241 |
| delta_otsA_trehalose | 1.896 | 0.495 |