Top 10 genes with highest correlation to Rv2063A/mazF7:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1843c/guaB1 | (cc=0.6178) | info on Rv1843c/guaB1 |
| Rv0846c/- | (cc=0.5895) | info on Rv0846c/- |
| Rv2636/- | (cc=0.5764) | info on Rv2636/- |
| Rv3367/PE_PGRS51 | (cc=0.5739) | info on Rv3367/PE_PGRS51 |
| Rv3401/- | (cc=0.562) | info on Rv3401/- |
| Rv1815/- | (cc=0.5496) | info on Rv1815/- |
| Rv1834/lipZ | (cc=0.5484) | info on Rv1834/lipZ |
| Rv3532/PPE61 | (cc=0.5374) | info on Rv3532/PPE61 |
| Rv2687c/- | (cc=0.5313) | info on Rv2687c/- |
| Rv2340c/PE_PGRS39 | (cc=0.5297) | info on Rv2340c/PE_PGRS39 |
Correlation of Rv2063A/mazF7 with Rv2636/-
Normalized LFCs for Rv2063A/mazF7:
(description and provenance of datasets)
| Rv2063A/mazF7 | Rv2636/- | |
| Fe_supp_jason_reseq | -0.63 | -0.073 |
| low_pH_jason_reseq | -1.272 | -0.942 |
| NO_jason_reseq | 0.706 | 0.071 |
| B6_jason_reseq | 1.121 | 1.243 |
| MHCII_jason_reseq | 1.353 | 1.783 |
| Isoniazid02 | 1.021 | -0.55 |
| Rifampicin4 | 0.181 | 0.162 |
| Ethambutol3 | 0.586 | 0.417 |
| Meropenem3 | 0.763 | -1.06 |
| Vancomycin16 | 0.743 | -0.642 |
| Rv2680_day32 | 0.594 | 1.092 |
| H37Rv_KO_MarP | 0.323 | 0.013 |
| hypoxia_3wks | 0.443 | 0.056 |
| hypoxia_6wks | -0.148 | -0.186 |
| glycerol | -0.031 | 0.263 |
| cholesterol | 0.237 | 0.048 |
| AJ | 0.869 | 0.345 |
| Bibs02 | 0.736 | 0.177 |
| Bibs02c | 0.897 | 0.358 |
| BL6 | 0.072 | -0.987 |
| BL6a | 0.023 | -0.442 |
| BXD01 | -1.052 | -1.222 |
| BXD010 | -1.219 | -0.989 |
| BXD011 | -1.222 | -1.507 |
| BXD03 | -0.161 | -1.037 |
| BXD04 | -2.091 | -1.588 |
| BXD05 | -0.061 | -0.968 |
| BXD06 | -1.529 | -1.495 |
| BXD07 | -1.083 | -1.077 |
| BXD08 | -0.626 | -0.781 |
| BXD09 | -1.238 | -1.87 |
| CAST | 0.647 | 0.174 |
| CCcont | -1.346 | -1.767 |
| DS01 | 0.37 | 0.399 |
| DS02 | 0.227 | 0.578 |
| DS04 | -0.441 | -0.409 |
| DS0c | -0.085 | 0.083 |
| GP01 | -1.251 | -0.456 |
| GP02 | 0.488 | -0.744 |
| GP0c | -0.325 | -0.677 |
| NOD | -0.172 | 0.574 |
| NZO | 0.029 | 0.126 |
| PWK | 0.226 | -0.057 |
| H37Rv_KO_CtpC | -0.772 | -1.77 |
| H37Rv_KO_CtpD | 0.756 | -0.581 |
| H37Rv_KO_Rv1272 | -1.001 | -1.089 |
| H37Rv_KO_SugABC | -0.395 | -1.719 |
| H37Rv_KO_MbtN | 0.0 | -0.848 |
| Trans05 | 0.319 | -0.088 |
| macrophage_unactivated | -2.03 | -0.653 |
| IL1 | -0.991 | -0.445 |
| Rapamycin | -0.758 | -0.546 |
| Tcell | -1.3 | -0.867 |
| GMCSF | -0.055 | -0.446 |
| IFNab | -0.747 | -1.155 |
| IFNg | -1.245 | -0.136 |
| IFNg_GMCSF1 | -1.684 | -0.079 |
| Rv1432_day32 | 2.451 | -0.16 |
| Rv1565c_day32 | 0.389 | 0.062 |
| secA2_input | 0.244 | 1.133 |
| delta_Rv3594 | -1.187 | -0.601 |
| delta_Rv3717 | 0.122 | -0.271 |
| delta_Rv3811 | -0.877 | -0.458 |
| delta_Rv0954 | -0.359 | 0.151 |
| PonA1 | 0.259 | -0.324 |
| EccD1_KO | 0.536 | -0.151 |
| EspI_KO | 0.371 | 0.271 |
| PE35_KO | 0.018 | -0.079 |
| PPE68_KO | -0.921 | -0.266 |
| glycerol2 | -0.597 | 0.534 |
| lignocerate | 0.039 | 0.498 |
| oleate | 0.189 | 0.303 |
| phosphatidylcholine | 0.176 | 0.709 |
| acetate | 0.183 | 0.156 |
| glucAc | 0.312 | 0.155 |
| Rv0950ko | 0.066 | -0.027 |
| Rv1096ko | -0.296 | -0.25 |
| Rv3684ko | -2.974 | -0.662 |
| delta_otsA_trehalose | 1.896 | 0.719 |